Acrolein is a highly reactive ␣,-unsaturated aldehyde, but the factors that control its reactions with nucleophilic groups on proteins remain poorly understood. Lipid peroxidation and threonine oxidation by myeloperoxidase are potential sources of acrolein during inflammation. Because both pathways are implicated in atherogenesis and high density lipoprotein (HDL) is anti-atherogenic, we investigated the possibility that acrolein might target the major protein of HDL, apolipoprotein A-I (apoA-I), for modification. Tandem mass spectrometric analysis demonstrated that lysine 226, located near the center of helix 10 in apoA-I, was the major site modified by acrolein. Importantly, this region plays a critical role in the cellular interactions and ability of apoA-I to transport lipid. Indeed, we found that conversion of Lys-226 to N ⑀ -(3-methylpyridinium)lysine by acrolein associated quantitatively with decreased cholesterol efflux from cells via the ATP-binding cassette transporter A1 pathway. In the crystal structure of truncated apoA-I, Glu-234 lies adjacent to Lys-226, suggesting that negatively charged residues might direct the modification of specific lysine residues in proteins. Finally, immunohistochemical studies with a monoclonal antibody revealed co-localization of apoA-I with acrolein adducts in human atherosclerotic lesions. Our observations suggest that acrolein might interfere with normal reverse cholesterol transport by HDL by modifying specific sites in apoA-I. Thus, acrolein might contribute to atherogenesis by impairing cholesterol removal from the artery wall.Chemical damage to key proteins may contribute to the pathogenesis of many disorders, including diabetes, Alzheimer disease, and ischemiareperfusion injury and perhaps to the aging process itself (1). Reactive aldehydes are an important class of agents that covalently modify proteins, and a variety of enzymatic and nonenzymatic mechanisms generate them in the body (2). Acrolein is the most reactive ␣,-unsaturated aldehyde, and it rapidly modifies biological nucleophiles (3). This potent electrophile may be produced in the body through lipid peroxidation or peroxidation of threonine by myeloperoxidase, and high levels are found in cigarette smoke (4 -6). Lipid peroxidation, myeloperoxidase, renal disease, and cigarette smoking all strongly associate with an increased risk of vascular disease (2,7,8). Moreover, epitopes recognized by a monoclonal antibody specific for lysine adducts of acrolein have been detected in macrophages of atherosclerotic lesions (4), raising the possibility that acrolein is one important agent for damaging proteins in the artery wall. Acrolein may also be a uremic toxin, and carbonyl stress appears to increase in patients with chronic renal failure (9).Like other ␣,-unsaturated aldehydes, acrolein selectively reacts with the sulfhydryl group of cysteine, the imidazole group of histidine, and the ⑀-amino group of lysine (10 -12). Indirect evidence suggests that it might also modify arginine (13). In vitro studies ha...