Cyt b 5 is the electron-carrier 'repair' protein that reduces met-Mb and met-Hb to their O 2 -carrying ferroheme forms. Studies of electron transfer (ET) between Mb and cyt b 5 revealed that they react on a "Dynamic Docking" (DD) energy landscape on which binding and reactivity are uncoupled: binding is weak and involves an ensemble of nearly isoenergetic configurations, only a few of which are reactive; those few contribute negligibly to binding. We set the task of redesigning the surface of Mb so that its reaction with cyt b 5 instead would occur on a conventional 'simple docking' (SD) energy landscape, on which a complex exhibits a well-defined (set of) reactive binding configuration (s), with binding and reactivity thus no longer being decoupled. We prepared a myoglobin (Mb) triple mutant (D44K/D60K/E85K; Mb(+6)) substituted with Zn-deuteroporphyrin, and monitored cytochrome b 5 (cyt b 5 ) binding and electron transfer (ET) quenching of the 3 ZnMb(+6) triplet state. In contrast, to Mb(WT), the three charge-reversals around the 'front-face' heme edge of Mb(+6) have directed cyt b 5 to a surface area of Mb adjacent to its heme, created a well-defined, most-stable structure that supports good ET pathways, and apparently coupled binding and ET: both K a and k et are increased by the same factor of ~ 2×10 2 , creating a complex that exhibits a large ET rate constant, k et = 10 6 1 s −1 , and is in slow exchange (k off ≪ k et ). In short, these mutations indeed appear to have created the sought-for conversion from DD to simple docking (SD) energy landscapes.Interactions between macromolecules are fundamental to most of biology. The goal of understanding and controlling protein-protein interactions has inspired numerous efforts to modulate the binding within high-affinity complexes of known structure,1 -6 with most alterations serving to weaken binding. To begin such efforts at the other extreme, with a pair of proteins that bind weakly, and by altering them to create a well-defined, highly functional complex, offers a different level of challenge. We here report dramatic progress in creating bmh@northwestern.edu. Cyt b 5 is the electron-carrier 'repair' protein that reduces met-Mb 7 and met-Hb 8,9 to their O 2 -carrying ferroheme forms. Studies of ET between Mb and cyt b 5 revealed that they react on a "Dynamic Docking" (DD) energy landscape (Fig 1, upper),10 -12 on which binding and reactivity are uncoupled: binding is weak and involves an ensemble of nearly isoenergetic configurations, only a few of which are reactive; those few contribute negligibly to binding. The sharp contrast of such behavior with that for the conventional 'simple docking' (SD) energy landscape (Fig 1, lower), on which a complex exhibits a well-defined (set of) reactive binding configuration(s), led us to ask whether it was possible to redesign the surface of Mb so that its reaction with cyt b 5 instead would occur on a SD landscape, with binding and reactivity thus no longer being decoupled.
NIH Public AccessThe low affinity of th...