We assessed whether increased cerebral activity suppressed baroreflex control of heart rate (HR) and, if so, whether this occurred prior to the onset of locomotion in daily activity of mice. We measured mean arterial pressure (MAP, arterial catheter), cerebral blood flow in the motor cortex (CBF, laser-Doppler flowmetry), and electroencephalogram in free-moving mice (n = 8) during 12 daytime hours. The contribution of baroreflex control of HR to MAP regulation was determined during a total resting period for ∼8 h from the cross-correlation function (R(t)) between spontaneous changes in HR ( HR) and MAP ( MAP) every 4 s and the sensitivity was determined from HR/ MAP where R(t) was significant (P < 0.05). The power density ratio of θ to δ wave band in electroencephalogram (θ/δ), determined every 4 s as an index of cerebral activity, was positively correlated with CBF during 73 ± 3% of the total resting period (P < 0.05) and with R(t) during 59 ± 2% (P < 0.05). When each measurement during the resting period was divided into seven bins according to the level of θ/δ, CBF was 91 ± 2% in the lowest bin and 118 ± 3% in the highest bin (P < 0.001), R(t) was −0.69 ± 0.06 and −0.27 ± 0.04 (P < 0.001) and HR/ MAP (beats min −1 mmHg −1 ) was −12.4 ± 0.9 and −7.5 ± 0.9 (P < 0.001), respectively, with significant correlations with θ/δ (all P < 0.002). Moreover, mice started to move in ∼30 sec after the sequential increases of θ/δ and R(t), mice started to move at 5 times higher probability than after a given time, followed by a rapid increase in MAP by ∼10 mmHg. These results suggest that increased cerebral activity suppresses baroreflex control of HR and this might be related to the start of voluntary locomotion with a rapid increase in MAP. Abbreviations CBF, cerebral blood flow; EEG, electroencephalogram; HR, heart rate; MAP, mean arterial pressure; R(t), cross-correlation function between spontaneous changes in HR and MAP; Z R (t) , transformed R(t); HR/ MAP, HR response to the spontaneous change in MAP; θ/δ, the power density ratio of θ to δ wave band in EEG.