2018
DOI: 10.1111/pbi.13022
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Insight into the evolution and functional characteristics of the pan‐genome assembly from sesame landraces and modern cultivars

Abstract: Summary Sesame ( Sesamum indicum L.) is an important oil crop renowned for its high oil content and quality. Recently, genome assemblies for five sesame varieties including two landraces ( S. indicum cv. Baizhima and Mishuozhima) and three modern cultivars ( S. indicum var. Zhongzhi13, Yuzhi11 and Swetha), have become available providing a rich resource for comparative genomic analyses and gene discovery. Here, we employed a refere… Show more

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Cited by 94 publications
(79 citation statements)
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“…These species-specific, fixed variants have implications in the evolutionary history of plant species such as domestication events. To date, several crop pan-genomes have been reported [5052] that show significant amount of structural variations in the genome. Pan-genomes resources should be included into the diversity discovery pipeline in the future.…”
Section: Discussionmentioning
confidence: 99%
“…These species-specific, fixed variants have implications in the evolutionary history of plant species such as domestication events. To date, several crop pan-genomes have been reported [5052] that show significant amount of structural variations in the genome. Pan-genomes resources should be included into the diversity discovery pipeline in the future.…”
Section: Discussionmentioning
confidence: 99%
“…These species-specific, fixed variants have implications in the evolutionary history of plant species such as domestication events. To date, several crop pan-genomes have been reported [50][51][52] that show significant amount of structural variations in the genome. Pan-genomes resources should be included into the diversity discovery pipeline in the future.…”
Section: Discussionmentioning
confidence: 99%
“…Recent genomic analysis has highlighted a significant gene presence absence variation in plant species, with disease resistance genes tending to demonstrate significant presence/absence variation [ 70 , 73 , 192 , 193 , 194 ]. This has led to the construction of pangenomes along with corresponding structural variation data including copy number and presence/absence variations for a wide range of crop species [ 195 , 196 ] including Brassica species [ 70 , 71 , 72 , 73 , 197 ].…”
Section: Genome Sequencing In Brassica Species mentioning
confidence: 99%