The instantaneous frequency (IF) is an important feature for the analysis of nonstationary signals. For IF estimation, the time–frequency representation (TFR)-based algorithm is used in a common class of methods. TFR-based methods always need the representation concentrated around the “true” IFs and the number of components within the signal. In this paper, we propose a novel method to adaptively estimate the IFs of nonstationary signals, even for weak components of the signals. The proposed technique is not based on the TFR: it is based on the frequency estimation operator (FEO), and the short-time Fourier transform (STFT) is used as its basis. As we know, the FRO is an exact estimation of the IF for weak frequency-modulated (FM) signals, but is not appropriate for strong FM modes. Through theoretical derivation, we determine that the fixed points of the FEOwith respect to the frequency are equivalent to the ridge of the STFT spectrum. Furthermore, the IF of the linear chirp signals is just the fixed points of the FEO. Therefore, we apply the fixed-point algorithm to the FEO to realize the precise and reliable estimation of the IF, even for highly FM signals. Finally, the results using synthetic and real signals show the utility of the proposed method for IF estimation and that it is more robust than the compared method. It should be noted that the proposed method employing the FEO only computes the first-order differential of the STFT for the chirp-like signals, while it can provide a result derived using the second-order estimation operator. Moreover, this new method is effective for the IF estimation of weak components within a signal.