“…Gaining a functional understanding of the molecular transducers of exercise and training may require new and complementary tools, beyond transcriptomic analysis. The robust, high‐throughput and unbiased nature of liquid chromatography‐based tandem MS (LC–MS/MS) provides an ideal candidate to spearhead the large‐scale identification of proteins from biological samples, an exciting scientific venture termed “proteomics.” 23,24 Until recently, the majority of proteomics‐based investigations in skeletal muscle have focused their efforts on characterizing global changes to protein abundance in response to exercise and training, termed “expression proteomics.” For example, by comparing prolonged resistance and endurance training, expression proteomics in human skeletal muscle has validated, to a larger scale, the long‐held contention that these modalities differentially regulate skeletal muscle proteins, while concomitantly providing deeper insights into the endurance and resistance training‐mediated regulation of oxidative metabolism and hypertrophy, respectively 25–27 . Importantly, major advantages to proteomics analyses are the detection of secreted proteins, PTMs (e.g., phosphorylation, acetylation, and ubiquitination), and protein–protein interactions, which are key exercise‐responsive elements to muscle plasticity that remain undetectable using conventional transcriptomic approaches 23,28 .…”