24Mycetoma is a devastating neglected tropical disease, caused by various fungal 25 and bacterial pathogens. Correct diagnosis to the species level is mandatory for 26 proper treatment. In endemic areas, various diagnostic tests and techniques are 27 in use to achieve that, and that includes grain culture, surgical biopsy 28 histopathological examination, fine needle aspiration cytological (FNAC) 29 examination and in certain centres molecular diagnosis such as PCR. 30 In this retrospective study, the sensitivity, specificity and diagnostic accuracy of 31 grain culture, surgical biopsy histopathological examination and FNAC to identify 32 the mycetoma causative organisms were determined. The histopathological 33 examination appeared to have better sensitivity and specificity.
34The histological examination results were correct in 714 (97.5%) out of 750 35 patients infected with Madurella mycetomatis, in 133 (93.6%) out of 142 patients 36 infected with Streptomyces somaliensis, in 53 (74.6%) out of 71 patients infected 37 with Actinomadura madurae and in 12 (75%) out of 16 patients infected with 38 Actinomadura pelletierii. 39 FNAC results were correct in 604 (80.5%) out of 750 patients with Madurella 40 mycetomatis eumycetoma, in 50 (37.5%) out of 133 Streptomyces somaliensis 41 patients, 43 (60.5%) out of 71 Actinomadura madurae patients and 11 (68.7%) out 42 of 16 Actinomadura pelletierii. The mean time required to obtain the FNAC result 43was one day, and for the histopathological examinations results it was 3.5 days, 44 and for grain, it was a mean of 16 days.
45In conclusion, histopathological examination and FNAC are more practical 46 techniques for rapid species identification than grain culture in many endemic 47 regions. 48 49 50 Author summary 51 In mycetoma endemic regions, the medical and health settings are commonly 52 suboptimal, and only a few diagnostic tests and techniques are available. That had 53 badly affected the patients' proper diagnosis and management and thus the late 54presentation of patients with advanced disease. In this retrospective study, the 55 experience of the MRC on the common in use diagnostic tests in the period 56 between 1991 and 2018 is presented.
57In this study, the sensitivity, specificity rates and diagnostic accuracy of grain 58 culture, surgical biopsy histopathological examination and FNAC to identify the 59 mycetoma causative organisms were determined. The histopathological 60 examination appeared to have better sensitivity and specificity. Furthermore, the 61 grain culture identification needs high experience, it is the tedious procedure, and 62 cross-contamination is common hence misdiagnosis is frequent. It can be 63 concluded that histopathological examination and FNAC are more practical 64 techniques for rapid species identification than grain culture in many endemic 65 regions with poor diagnostic setting. 66 67 68 Introduction: 69 Mycetoma is a chronic granulomatous subcutaneous inflammatory infection 70 endemic in subtropical and tropical re...