2011
DOI: 10.1016/j.jcis.2011.03.081
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Interaction of the cationic peptide bactenecin with mixed phospholipid monolayers at the air–water interface

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Cited by 16 publications
(15 citation statements)
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“…Therefore, The β-hairpin model was generated using a “non-canonical” β-hairpin template of cystatin (PDB file 1cew, fragment 50–61), which allows the arrangement of Cys 3 and Cys 11 residues in such a way as to form the disulfide across the non-hydrogen bonded pair of residues and the formation of a 3-residue β-turn in α R γ R β conformation. In this bactenecin model, the disulfide bridge has the gauche-gauche-gauche conformation, in agreement with experimental data [45]. After substituting all the residues in the template using QUANTA (Accelrys Software Inc.) and minimization of local energy by CHARMM (200 steps with adopted basis Newton-Raphson method, ε = 10), the models were positioned in the lipid bilayer using our program PPM 2.0 [38].…”
Section: Methodssupporting
confidence: 80%
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“…Therefore, The β-hairpin model was generated using a “non-canonical” β-hairpin template of cystatin (PDB file 1cew, fragment 50–61), which allows the arrangement of Cys 3 and Cys 11 residues in such a way as to form the disulfide across the non-hydrogen bonded pair of residues and the formation of a 3-residue β-turn in α R γ R β conformation. In this bactenecin model, the disulfide bridge has the gauche-gauche-gauche conformation, in agreement with experimental data [45]. After substituting all the residues in the template using QUANTA (Accelrys Software Inc.) and minimization of local energy by CHARMM (200 steps with adopted basis Newton-Raphson method, ε = 10), the models were positioned in the lipid bilayer using our program PPM 2.0 [38].…”
Section: Methodssupporting
confidence: 80%
“…Recent experimental studies indicated that Arg-rich bactenecin has a β-turn structure stabilized by a disulfide bridge in a distinct conformation that does not change significantly upon incorporation of the peptide into the lipid monolayer [45]. In addition, it has been observed that bactenecin is prone to self-association and formation of filament-like structures on membrane surfaces [45].…”
Section: Resultsmentioning
confidence: 99%
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“…Upon increasing peptide concentration from 16 to 90 mg mL -1 , planar-like carpet domains were created [34,35].…”
Section: Accepted Manuscriptmentioning
confidence: 99%