The aim of this work was to characterize the antibiotic susceptibility and genetic diversity of 41 Streptococcus gallolyticus subsp. gallolyticus isolates: 18 isolates obtained from animals and 23 human clinical isolates. Antibiotic susceptibility was determined by the semiautomatic Wider system and genetic diversity by pulsed-field gel electrophoresis (PFGE) with SmaI. Animal isolates grouped separately in the PFGE analysis, but no statistical differences in antimicrobial resistance were found between the two groups. The LMG 17956 sequence type 28 (ST28) strain recovered from the feces of a calf exhibited high levels of resistance to vancomycin and teicoplanin (MIC, >256 mg/liter). Its glycopeptide resistance mechanism was characterized by Southern blot hybridization and a primer-walking strategy, and finally its genome, determined by whole-genome sequencing, was compared with four closely related S. gallolyticus subsp. gallolyticus genomes. Hybridization experiments demonstrated that a Tn1546-like element was integrated into the bacterial chromosome. In agreement with this finding, whole-genome sequencing confirmed a partial deletion of the vanY-vanZ region and partial duplication of the vanH gene. The comparative genomic analyses revealed that the LMG 17956 ST28 strain had acquired an unusually high number of transposable elements and had experienced extensive chromosomal rearrangements, as well as gene gain and loss events. In conclusion, S. gallolyticus subsp. gallolyticus isolates from animals seem to belong to lineages separate from those infecting humans. In addition, we report a glycopeptide-resistant isolate from a calf carrying a Tn1546-like element integrated into its chromosome. N ew taxonomic criteria have recently been applied to the Streptococcus bovis/equinus complex, mainly on the basis of the genetic diversity of the sodA gene, which is considered the best target for adequate identification (1). These taxonomic advances have permitted the study of the epidemiological correlations between particular subspecies and specific human pathologies (2), including gastrointestinal colonization by Streptococcus gallolyticus subsp. gallolyticus (formerly Streptococcus bovis biotype I) and its coincidence with colorectal cancer (3).The rates of colonization by S. gallolyticus subsp. gallolyticus are around 5 to 10% in humans but could be much higher in animals (4). Bacteremia and endocarditis are the main relevant clinical manifestations in humans and in avian species (5, 6). The mortality rate in a broiler flock outbreak was 4.3% (7), and the organism has also been implicated in other veterinary pathologies (8, 9).Similarities and differences between S. gallolyticus subsp. gallolyticus isolates from humans and animals have been described previously (8, 10), including the existence of particular virulent clones with increased invasion and adherence abilities, which favor bloodstream infections (11-13). A recent multilocus sequence typing (MLST)-based study demonstrated a lack of specificity for any particu...