T he highly used C57BL/6 mouse inbred strain is the preferred choice for mouse transgenic and knockout studies 1 and was the first strain whose genome was fully sequenced. 2 However, several C57BL6 substrains have emerged over the years, each showing genomic differences because of genetic drift and displaying various phenotypic differences. 1,3 One example is the difference between the C57BL/6J and C57BL/6N substrains. The C57BL/6 strain was initially developed at The Jackson Laboratory, and mice from that colony are identified as C57BL/6J. In 1951, some mice were separated from the original colony to initiate a new colony at the National Institutes of Health, the latter being identified as C57BL/6N. 1 Despite the recognition that genetic drift between mouse strains may compromise the reproducibility of experimental data over time and place, 4 there are still many publications where the substrain of origin of C57BL/6 mice is not mentioned. However, a recent study reported that the cardiac output of C57BL/6N male mice is higher than that of their C57BL/6J counterparts.5 Likewise, the effects of transverse aortic constriction on survival and the remodeling of left ventricles (LV) are much greater in C57BL/6N than in C57BL/6J mice. 6 Thus, evidence indicates that genetic drift can significantly alter cardiac phenotypes in the established C57BL/6 inbred strain.Despite indications that hearts from the C57BL/6N and C57BL/6J mouse substrains differ in terms of their contractility, as well as their responses to stress-induced overload (including survival rate, maintenance of cardiac function, and development of hypertrophy), no information is available about the underlying molecular and cellular mechanisms. We compared the effects of either subacute (48 hours) and chronic (14 days) infusions of angiotensin II (Ang II) on LV remodeling in both substrains. As we observed substrainspecific differences in expression for some genes known to be specific for particular cell-types, we further confirmed Abstract-Despite indications that hearts from the C57BL/6N and C57BL/6J mouse substrains differ in terms of their contractility and their responses to stress-induced overload, no information is available about the underlying molecular and cellular mechanisms. We tested whether subacute (48 hours) and chronic (14 days) administration of angiotensin II (500 ng/kg per day) had different effects on the left ventricles of male C57BL/6J and C57BL/6N mice. Despite higher blood pressure in C57BL/6J mice, chronic angiotensin II induced fibrosis and increased the left ventricular weight/body weight ratio and cardiac expression of markers of left ventricular hypertrophy to a greater extent in C57BL/6N mice. Subacute angiotensin II affected a greater number of cardiac genes in C57BL/6N than in C57BL/6J mice. Some of the most prominent differences were observed for markers of (1) macrophage activation and M2 polarization, including 2 genes (osteopontin and galectin-3) whose inactivation was reported as sufficient to prevent angiotensin...