Background and aim of the study: Scientific Societies do not recommend the use of cell-free DNA (cfDNA) testing as a first-tier screening for microdeletion and microduplication syndromes (MMs). The aim of this study was to review the current available literature on the performance of cell-free DNA as a screening for MMs.Methods: Medline, Embase and the Cochrane Library were searched electronically from 2000 to January 2020 and articles reporting the diagnostic performance of cfDNA screening for MMs in large (>5000 cases) series were included. Betweenstudy heterogeneity and random effect model for screen positive rate (SPR), false positive rate (FPR) and positive predictive value (PPV) were calculated.
Results:We identified 42 papers, seven included, for a total of 474,189 pregnancies and 210 cases of MMs. Diagnostic verification of positive cases was available overall in 486 (71.68 %) of 678 cases. The weighted pooled SPR, FPR and PPV were 0.19% (95% CI = 0.09-0.33), 0.07 (95% CI = 0.02-0.15) and 44.1 (95% CI = 31.49-63.07).In conclusion, the pooled PPV of cfDNA testing in screening for MMs was about 40%, ranging from 29% to 91%, for an overall FPR <0.1%.
Conclusions:No confirmatory analysis was available in cases that did not undergo invasive testing, which were the vast majority of cases with a negative test, and therefore, the DR and the negative predictive value cannot be determined.
K E Y W O R D Scell-free DNA, fetal cells, fetal diseases, fetal genetic analysis, genetic counseling, nucleic acids & proteins, noninvasive prenatal testing, fetal medicine and diagnostic procedures, whole genome sequencing
Key PointsWhat's already known about this topic? � Cell-free DNA (cfDNA) as screening test for microduplication (MMs) is burdened by a high variability of positive predictive value (PPV) which is far from being considered acceptable. Scientific Societies worldwide are concordant in recommending not to offer cfDNA testing for MMs outside well-defined research protocols.