Under these conditions, MDCK cells spontaneously formed either hollow spherical cysts or flat monolayer sheets, respectively. Microarray analysis of gene expression revealed a twofold or greater expression difference in 732 gene sets from MDCK cysts compared with monolayers (false discovery rate or FDR-adjusted P values Ͻ0.05). Interleukin-8 (IL-8) was reproducibly found to be among the genes whose expression was most dramatically upregulated, and this behavior was verified through real-time PCR analysis. The level of IL-8 protein expression was significantly increased in 3D MDCK cultures compared with that detected in cells in 2D culture. Hepatocyte growth factor (HGF) induces MDCK cells in 3D culture to form linear tubule-like structures. We found that HGF stimulation caused MDCK cells in 3D culture to decrease the expression of IL-8 at both the mRNA and protein levels. Furthermore, the addition of recombinant IL-8 to HGF-stimulated 3D MDCK cultures was sufficient to partially reverse the tubulogenic effects of HGF, resulting in the formation of cystic structures. These data suggest that IL-8 participates in the formation of cystic structures by MDCK cells in 3D culture and that HGF may stimulate tubulogenesis through the suppression of IL-8. renal epithelial cells; interleukin-8; hepatocyte growth factor; morphogenesis; Madin-Darby canine kidney IN TISSUES SUCH AS the lungs, intestines, and kidneys, epithelial cells form barriers between an organism and its external milieu. The surface membranes of these epithelial cells are exposed to disparate environments and are divided into discrete apical and basolateral domains (4,8,37,39). These membrane domains are established and maintained through the directed trafficking and selective retention of cellular components. In addition to this capacity to generate polarized plasma membrane domains with distinct biochemical and physiological properties, epithelial cells must also be able to organize themselves into complex multicellular architectures. The formation and maintenance of these structures is dependent both upon intercellular interactions between epithelial cells and upon cell-matrix interactions.Interactions between an individual cell and its surrounding environment are essential in the activation of signaling networks that subsequently regulate polarity and the determination of epithelial structural morphology (6,7,9,40,48). As epithelial cells establish polarity and interactions with their environment they can begin to function together to generate organized multicellular structures. This property is exemplified by comparing the behaviors of epithelial cell lines, such as Madin-Darby canine kidney (MDCK) cells, grown in twodimensional (2D) vs. three-dimensional (3D) culture conditions. MDCK cells form flat monolayer sheets when grown atop tissue culture plastic, permeable filter supports, and various extracellular matrix (ECM) substrates in traditional 2D culture conditions. When grown in 3D culture, in which cells are embedded within an ECM substrate, MDCK...