Vibrational
imaging such as Raman microscopy is a powerful technique
for visualizing a variety of molecules in live cells and tissues with
chemical contrast. Going beyond the conventional label-free modality,
recent advance of coupling alkyne vibrational tags with stimulated
Raman scattering microscopy paves the way for imaging a wide spectrum
of alkyne-labeled small biomolecules with superb sensitivity, specificity,
resolution, biocompatibility, and minimal perturbation. Unfortunately,
the currently available alkyne tag only processes a single vibrational
“color”, which prohibits multiplex chemical imaging
of small molecules in a way that is being routinely practiced in fluorescence
microscopy. Herein we develop a three-color vibrational palette of
alkyne tags using a 13C-based isotopic editing strategy.
We first synthesized 13C isotopologues of EdU, a DNA metabolic
reporter, by using the newly developed alkyne cross-metathesis reaction.
Consistent with theoretical predictions, the mono-13C (13C≡12C) and bis-13C (13C≡13C) labeled alkyne isotopologues display Raman
peaks that are red-shifted and spectrally resolved from the originally
unlabeled (12C≡12C) alkynyl probe. We
further demonstrated three-color chemical imaging of nascent DNA,
RNA, and newly uptaken fatty-acid in live mammalian cells with a simultaneous
treatment of three different isotopically edited alkynyl metabolic
reporters. The alkyne vibrational palette presented here thus opens
up multicolor imaging of small biomolecules, enlightening a new dimension
of chemical imaging.