Subtelomeres 2013
DOI: 10.1007/978-3-642-41566-1_1
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Cited by 7 publications
(5 citation statements)
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“…Numerous copies of the telomeric repeat and its derivatives were detected in the subtelomeres of human, Arabidopsis and wheat chromosomes (Ambrosini, Paul, Hu, & Riethman, 2007;Uchida, Matsunaga, Sugiyama, & Kawano, 2002). In organisms previously studied, the subtelomeric region is defined as the extension between the telomere and the most distal chromosome-specific sequence (Kuo et al, 2006;Louis, 2014;Mefford et al, 2002;Pryde, Gorham, & Louis, 1997). A common feature supposed to be shared by plants is a stretch of tens of kilobases of highly rearranged and repetitive DNA before the first active gene at the distal part of subtelomeres (Alkhimova et al, 2004;Ohmido, Kijima, Ashikawa, de Jong, & Fukui, 2001;Pearce, Pich, Harrison, Flavell, & Heslop-Harrison, 1996;Röder et al, 1993;Vershinin, Schwarzacher, & Heslop-Harrison, 1995;Wu & Tanksley, 1993).…”
Section: Discussionmentioning
confidence: 99%
“…Numerous copies of the telomeric repeat and its derivatives were detected in the subtelomeres of human, Arabidopsis and wheat chromosomes (Ambrosini, Paul, Hu, & Riethman, 2007;Uchida, Matsunaga, Sugiyama, & Kawano, 2002). In organisms previously studied, the subtelomeric region is defined as the extension between the telomere and the most distal chromosome-specific sequence (Kuo et al, 2006;Louis, 2014;Mefford et al, 2002;Pryde, Gorham, & Louis, 1997). A common feature supposed to be shared by plants is a stretch of tens of kilobases of highly rearranged and repetitive DNA before the first active gene at the distal part of subtelomeres (Alkhimova et al, 2004;Ohmido, Kijima, Ashikawa, de Jong, & Fukui, 2001;Pearce, Pich, Harrison, Flavell, & Heslop-Harrison, 1996;Röder et al, 1993;Vershinin, Schwarzacher, & Heslop-Harrison, 1995;Wu & Tanksley, 1993).…”
Section: Discussionmentioning
confidence: 99%
“…The difference in the distribution of genes in the different genomic regions was evaluated using Chi-squared tests (p < 0.05), by comparing those within and outside subtelomeric regions, with the null hypothesis that they are characterized by similar frequencies. Here, we regarded the first and last 500 kb from chromosome ends as subtelomeres [71,[122][123][124]. Furthermore, the synteny and conservation of the location of the different host-rangeassociated genes were studied with SynChro which revealed the synteny breakpoints between the reference and query genomes [54].…”
Section: Genomic Distribution Of the Host-range-associated Genesmentioning
confidence: 99%
“…The sequences found adjacent to the telomeres are often called “subtelomeres.” Strictly speaking, however, for a sequence to be classified as “subtelomeric,” it should contain motifs that only occur near to chromosome termini, and should be duplicated at multiple ends ( Louis, 2014 ; Figure 1A ). True subtelomeres in many organisms have a domain structure, with distal segments containing short, subtelomere-specific, tandem repeat motifs, and proximal segments harboring a number of genes that are duplicated at multiple chromosome ends ( Pryde et al, 1997 ).…”
Section: Introductionmentioning
confidence: 99%