Ship canals, which play a crucial role in facilitating transport, exert significant and long-term impacts on wetland ecosystems. For social and economic development, numerous countries have put forward plans for ship canals. This paper reviews the literature on the ecological effect of ship canals on wetland ecosystems, identifies research gaps, and suggests future research directions. Ship canals typically involve high construction intensity, usually including river regulation, ship locks, and water diversion for navigation. The ecological effects of ship canals on wetlands refer to changing wetland hydrological processes, degrading water quality, eliminating wetland botany, disturbing wetland animals, and increasing ecological threats. The cumulative impact can either alter the trend of ecological succession or degrade biodiversity. Thus, there is a need for further research to elucidate the mechanisms by which canals affect wetland ecosystems, enhance the practices for wetland protection associated with canals, and develop a robust evaluation system for green canal projects.