In free-space optical communication, the transmission of signal light and beacon light of differing wavelengths through the same atmospheric channel encounters variations in how the atmospheric refractive index absorbs and scatters light. This leads to distinct degrees of wavefront aberrations between the signal and beacon lights. In this study, we employed statistical optics to derive wavefront phase structure functions for both signal and beacon lights under conditions of strong turbulence. We explored how wavefront distortion varies among beams of different wavelengths after propagation through such turbulent conditions. Our findings revealed that as the turbulence outer scale escalates, the difference in wavefront distortion between signal and beacon lights stabilizes after an initial increase, assuming constant wavelengths. Furthermore, we observed significant changes in the relative wavefront aberrations when the inner scale of turbulence surpasses the separation between two points on the receiving apertures. As the disparity in wavelength decreases, so does the difference in wavefront aberrations. Finally, we propose a method for correcting wavefront aberrations based on coefficients of Zernike polynomials corresponding to beams with different wavelengths. This approach is validated through simulation and experimentation, demonstrating an 11% enhancement in the signal-to-optical Strehl ratio and a 0.072 increase in spot energy after the addition of correction coefficients compared with before their inclusion. These results solidify the efficacy of our method in improving adaptive optics correction accuracy.