DedicationThis dissertation is dedicated to my late father Edward Matheny, my mother Dana Matheny, and brother Sean Matheny for their unyielding support and belief in me throughout the years.iv Acknowledgements I would like to thank my advisor Michael A. Whitt for the opportunity to work in his lab and the training I received. Also, thanks to my committee members Allen Portner, PhD., Charles J. Russell, Ph.D., Susan E. Senogles, Ph.D., and James Patrick Ryan, Ph.D. for providing excellent insights, ideas, and guidance during my research.My gratitude is also extended to present and past members of the Whitt laboratory. Erika Dillard, Chad Mire Ph.D., Himangi Jayakar Ph.D., Jeetendra Eswararka Ph.D., Makiko Wantannabe Ph.D., and Carolyn Matthews for their support and help. Additionally, I would like to thank other members of the Molecular Sciences department for offering input, guidance, and support.v Abstract Vesicular stomatitis virus (VSV) is an enveloped, nonsegmented, negative-sense, RNA virus belonging to the Rhabdoviridae family. VSV is considered the prototypic Rhabdovirus due to its simple genetic organization, broad host cell tropism, and ability to be easily grown in cell culture. Therefore, VSV has been used as the prototype to study viral entry, transcription, replication, and assembly. Viral entry, a critical step in the lifecycle of the virus, is mediated by the outer surface protein, G and will be the focus of this dissertation.We hypothesize that the highly conserved residues in the membrane-proximal region of VSV G protein are critical to membrane fusion through participation in low pHinduced conformational changes and stability of theses structures. This hypothesis was tested initially through the use of site directed mutagenesis and then by studying rapidly acquired second site mutations. Residues that are conserved completely or conserved for their biochemical properties were either deleted or mutated to alanines. The mutated G proteins were examined through the use of transient transfection assays for their surface expression levels, fusion capacity, and ability to undergo pH dependent conformational changes. Mutation of a conserved HPH motif (H423/P424/H425) resulted in a dramatic decrease in surface expression. ΔH423/P424/H425 was completely fusion defective as assessed by syncytium formation assays that measured cell-cell fusion. Likewise, the cell-cell fusion activity for ΔH425 was affected in that the pH threshold required to trigger the fusion event was decreased. These findings support previous reports suggesting a requirement for histidine protonation in order for the pH dependent conformational changes needed for membrane fusion to occur. Recombinant viruses encoding the mutated G proteins were recovered and all of the viruses expressing G proteins with reduced cell-cell fusion capacity, as compared to wild type, grew to lower titers, with the exception of one mutant: D435A/D436A/E437A. Mutation of the DDE motif resulted in a G protein with a reduced capacity to fuse in transiently t...