Destruction processes of composite materials under lightning stroke effect have been studied. The results of characteristic damages of samples have been presented upon a series of tests conducted with standard lightning currents and those ones whose shape is close to actual lightning stroke. There have been exhibited distinctions between the levels of sample damages: in the second case significant damages of composite matrix external layers have been shown, among which multiple destructions of bundles of carbon fibers at a depth of several layers, layer delamination and cavities formed inside sample. There have been described the results of generalized analysis of damages obtained by applying nondestructive inspection methods: stereoscopic microscope investigation and X-ray microtomography. The mechanism of damages has been presented on the basis of obtained data. The results of testing electrical, mechanical, thermal properties of composite samples have been given upon a set of experiments for lightning current resistance.