The bodies and faecal pellets of the house dust mite (
HDM
),
Dermatophagoides pteronyssinus
, are the source of many allergenic and nonallergenic proteins. One of these, the 14‐
kD
a bacteriolytic enzyme Lyt
FM
, originally isolated from the spent
HDM
growth medium, may contribute to bacteriolytic activity previously detected by zymography at 14
kD
a in the culture supernatants of some bacterial species isolated from surface‐sterilised
HDM
. Based on previously reported findings of lateral gene transfer between microbes and their eukaryotic hosts, we investigated the presence of
lyt
FM
in the genomes of nine Gram‐positive bacteria from surface‐sterilised
HDM
, and the expression by these isolates of Lyt
FM
and its variants Lyt
FM
1/Lyt
FM
2. The
lyt
FM
gene was detected by
PCR
in the genomes of three of the isolates:
Bacillus licheniformis
strain 1,
B. licheniformis
strain 2 and
Staphylococcus aureus
. Expression of the variant Lyt
FM
1 was detected in culture supernatants of these bacteria by mass spectrometry (
MS
) and
ELISA
, and the bacterial Lyt
FM
proteins were shown by zymography to be able to hydrolyse peptidoglycan. Our previous reports of Lyt
FM
homologues in other mite species and their phylogenetic analysis had suggested that they originated from a common mite ancestor. The phylogenetic analysis reported herein and the detection of other
D. pteronyssinus
proteins by
MS
in the culture supernatants of the three isolates that secreted Lyt
FM
1 further support the hypothesis of lateral gene transfer to the bacterial endosymbionts from their
HDM
host. The complete sequence homology observed between the genes amplified from the microbes and those in their eukaryotic host indicated that the lateral gene transfer was an event that occurred recently.