We have investigated the regulation of accumulation of ribulose-1,5-bisphosphate carboxylase/oxygenase activase and the periplasmic carbonic anhydrase (CA) in Chlamydomonas reinhardtii. In algae, the periplasmic CA is required for efficient CO, fixation when the CO, concentration is low. These two proteins are affected differently by the CO, level in the environment. The steady-state level of the ribulose-l,5-bisphosphate carboxylase/oxygenase activase transcript was only slightly and transiently affected by a reduction in ambient CO, concentration, whereas the CA transcript level was strongly induced by air containing ambient (350 parts per million) CO, (low CO,) conditions. The transcripts for both proteins showed strong oscillations when the alga was grown under a 12-h light/l2-h dark growth regime, with the transcripts encoding these proteins present just before the onset of the light cycle. l h e observation that the CA transcript was made in the dark was surprising, since earlier reports indicated that active photosynthesis was required for the induction of the periplasmic CA. Further experiments demonstrated that the CA transcript was partially induced under low-CO, conditions even when the switch to low CO, was done in the dark. Our results suggest that C. reinhardtiimight sense the CO, concentration in a more direct manner than through C, or C, cycle intermediates, which has been previously suggested.In higher plants, a number of proteins are required for growth on low CO,. These proteins include Rubisco activase, the enzymes of the C, or photorespiratory cycle, and enzymes involved in nitrogen assimilation. In addition to these proteins, unicellular algae also have a C0,-concentrating mechanism that overcomes the slow diffusion of CO, in the aqueous environment under low-CO, conditions. The C0,-concentrating mechanism in Chlamydomonas reinhardtii is influenced by the level of CO, in the environment (Badger et al., 1980; Aizawa and Miyachi, 1986). C. reinhardtii cells that are grown under high-CO, conditions have an apparent affinity for CO, similar to that of C, plants, requiring about 20 to 30 ~L M CO, for maximal rates of photosynthesis. However, when alga1 cells are placed in low CO,, their apparent affinity for CO, increases and only 1 to 2 ~L M CO, is required for high rates of photosynthesis. The induction of the C0,-concentrating mechanism results in the synthesis of at least six proteins (Coleman et al.,