Arthrobacter aurescens strain TC1 metabolizes atrazine to cyanuric acid via TrzN, AtzB, and AtzC. The complete sequence of a 160-kb bacterial artificial chromosome clone indicated that trzN, atzB, and atzC are linked on the A. aurescens genome. TrzN, AtzB, and AtzC were shown to be functional in Escherichia coli. Hybridization studies localized trzN, atzB, and atzC to a 380-kb plasmid in A. aurescens strain TC1.The complete nucleotide sequences of over 100 bacterial plasmids are now available, but most of these plasmids are relatively small and of interest primarily in microbial pathogenesis (for example, in the context of antibiotic resistance or toxin production). By contrast, only a limited number of large catabolic plasmids or catabolic islands on chromosomes have been sequenced. Examples include plasmids pNL1 from Sphingomonas aromaticivorans strain F199 (23), pAO1 from Arthrobacter nicotinovorans (11), pACR1 from Pseudomonas resinovorans strain CA10 (13), the TOL plasmid pWW0 from Pseudomonas putida (9), pBD2 from Rhodococcus erythropolis BD2 (31), pADP-1 from Pseudomonas sp. strain ADP (16), and the 105-kb catabolic island from Pseudomonas sp. strain B13 (28). Large catabolic plasmids can be difficult to isolate for sequencing. Thus, to facilitate widespread sequencing of large catabolic gene regions, more innovative strategies are needed. For example, plasmids have been identified via whole-genome shotgun sequencing of Deinococcus radiodurans (41) and Enterococcus faecalis (19).A wide variety of bacteria degrading the herbicide atrazine have been reported (2,14,21,22,32,36,37,43), and in all cases examined except one (3) the genes involved are located on plasmids (5,25,36,39). In Pseudomonas sp. strain ADP (14), the six atrazine-catabolic genes (atzA, atzB, atzC, and atzDEF) have been localized to plasmid pADP-1, from which the complete nucleotide sequence is now available (16). The atzA, atzB, and atzC genes have also been localized to different-sized plasmids in the gram-negative bacteria Chelatobacter heintzii, Stenotrophomonas maltophilia, and Pseudaminobacter spp., and hybridization analyses indicate that the atzB and atzC genes reside on a 117-kb plasmid in the gram-positive bacterium Arthrobacter crystallopoietes (25,36). The presence of nearly identical atrazine genes in Agrobacterium, Clavibacter, Rhizobium, Pseudomonas, Alcaligenes, and Ralstonia strains (2,5,22,24,33,39) further suggests that horizontal gene transfer is involved in the dissemination of atrazine-catabolic genes.Some differences have been observed in the gene content of the gram-positive atrazine-degrading bacteria Nocardioides sp. strains C190, SP12, and C157, Arthrobacter crystallopoietes, and Arthrobacter sp. strain AD1 (3,21,24,25,32,37). Nocardioides sp. strain C190 (37) does not contain atzA, atzB, or atzC, and atrazine degradation is initiated by the product of the trzN gene, which has been cloned and sequenced previously (17). A. crystallopoietes was shown to contain trzN, atzB, and atzC (25).The isolation and characteri...