bLactococcus piscium is a psychrotrophic lactic acid bacterium and is known to be one of the predominant species within spoilage microbial communities in cold-stored packaged foods, particularly in meat products. Its presence in such products has been associated with the formation of buttery and sour off-odors. Nevertheless, the spoilage potential of L. piscium varies dramatically depending on the strain and growth conditions. Additional knowledge about the genome is required to explain such variation, understand its phylogeny, and study gene functions. Here, we present the complete and annotated genomic sequence of L. piscium MKFS47, combined with a time course analysis of the glucose catabolism-based transcriptome. In addition, a comparative analysis of gene contents was done for L. piscium MKFS47 and 29 other lactococci, revealing three distinct clades within the genus. The genome of L. piscium MKFS47 consists of one chromosome, carrying 2,289 genes, and two plasmids. A wide range of carbohydrates was predicted to be fermented, and growth on glycerol was observed. Both carbohydrate and glycerol catabolic pathways were significantly upregulated in the course of time as a result of glucose exhaustion. At the same time, differential expression of the pyruvate utilization pathways, implicated in the formation of spoilage substances, switched the metabolism toward a heterofermentative mode. In agreement with data from previous inoculation studies, L. piscium MKFS47 was identified as an efficient producer of buttery-odor compounds under aerobic conditions. Finally, genes and pathways that may contribute to increased survival in meat environments were considered.
Bacterial spoilage of perishable cold-stored foods is still a serious problem in the modern world. Modified-atmosphere packaging (MAP), based on the inhibitory effect of CO 2 on spoilage bacteria, is often used by the food industry to achieve a longer product shelf life. While it eliminates aerobic Gram-negative spoilage bacteria, MAP creates a positive selective pressure for lactic acid bacteria (LAB), which are resistant to high CO 2 concentrations (1, 2). Even though spoilage LAB grow slower than aerobic Gram-negative spoilage bacteria, they cause organoleptic and textural spoilage changes, such as discoloration and the formation of slime, gas, biogenic amines, and volatile organic compounds (1), in MAP food products.The most abundant genera in MAP food spoilage communities are Carnobacterium, Lactobacillus, Lactococcus, Leuconostoc, and Weissella (3). So far, Lactococcus piscium has been the only Lactococcus species with reported food spoilage activity (4, 5). It was first isolated from a diseased salmonid fish (6) but was later detected in MAP meat products, including beef, poultry, pork, and fish, where it frequently belongs to the predominant microbiota at the end of shelf life. L. piscium has been associated with meat spoilage (3, 5, 7-9), and it was recently also shown to be one of the predominating species in chilled packaged vegetable salads (10)...