A previous transcriptomic analysis of 3,032 fungal genes identified the Botrytis cinerea PIE3 (BcPIE3) gene to be up-regulated early in planta (A. Gioti, A. Simon, P. Le Pêcheur, C. Giraud, J. M. Pradier, M. Viaud, and C. Levis, J. Mol. Biol. 358:372-386, 2006). In the present study, BcPIE3 was disrupted in order to determine its implication in pathogenicity. BcPIE3 was shown to be a virulence factor, since the ⌬BcPIE3 mutant was blocked during the colonization of tomato and bean leaves, giving lesions reduced in size by at least 74%. Within the emopamil binding domain (EBD), BcPIE3 shows significant structural similarities to mammalian emopamil binding proteins (EBPs). Mammalian EBPs function as sterol isomerases, but an analysis of the sterol content and the results of growth inhibition experiments with the ⌬BcPIE3 strain indicated that BcPIE3 is dispensable for ergosterol biosynthesis. The systematic identification of EBD-containing proteins included in public databases showed that these proteins constitute a protein superfamily present only in eukaryotes. Phylogenetic analysis showed that the ancestral EBD-encoding gene was duplicated in the common ancestor of animals and fungi after the split from plants. Finally, we present evidence that the EBP phylogenetic clade of this superfamily has further expanded exclusively in euascomycetes, especially in B. cinerea, which contains three copies of the EBP gene.Botrytis cinerea is a ubiquitous fungus capable of infecting a wide range of plants, fruits, and ornamentals at any stage of their development (15,30). In order to identify novel pathogenicity determinants, we recently studied the expression profiles of B. cinerea genes during the infection of Arabidopsis thaliana leaves. Among the genes shown to be induced in planta, one called B. cinerea PIE3 (BcPIE3) was found to be highly expressed 24 to 29 h after the inoculation of the fungus onto the plant leaves (18). To gain insight into early infection events, this gene was further studied.BcPIE3 showed strong similarity to mammalian emopamil binding proteins (EBPs). EBPs are integral, nonglycosylated proteins of the endoplasmic reticulum membrane, characterized by the presence of four transmembrane (TM) segments forming a binding domain for the drug emopamil, a phenylalkylamine Ca 2ϩ antagonist. This domain is called the emopamil binding domain (EBD). Mammalian EBPs (43, 25) have received increasing attention due to their binding properties. Indeed, the binding of sigma ligands but also of numerous, structurally diverse drugs and fungicides on the EBD (36) exerts anti-ischemic effects in animal models (43). Mammalian EBPs have been further studied because of a number of syndromes caused by EBP gene mutations, such as the genetic disorder X-linked dominant chondrodysplasia punctata, Conradi-Hünermann syndrome (5, 26), CHILD (congenital hemidysplasia with ichthyosiform erythroderma and limb defects) syndrome (21), and the "tattered" mouse phenotype (13).According to the above-mentioned studies, the molecular patholo...