Heterogeneous nuclear ribonucleoproteins (hnRNPs) are abundant RNA-binding proteins that are implicated in splicing regulation. Here we investigate the role of a Drosophila hnRNP in splicing regulation in living animals. We find that overexpression of the Drosophila hnRNP HRB98DE leads to skipping of all internal exons in the Drosophila dopa decarboxylase (Ddc) pre-mRNA in vivo. These results indicate that HRB98DE has a splicing activity that promotes use of terminal splice sites. The effect of excess HRB98DE on Ddc splicing is transient, even though high levels of HRB98DE persist for at least 24 hr. This suggests that Drosophila larvae can induce a compensating mechanism to counteract the effects of excess HRB98DE.Nascent pre-mRNAs associate with a specific group of proteins to form heterogeneous nuclear ribonucleoprotein (hnRNP) complexes (1). The major protein components of hnRNP complexes from HeLa cells are the Al, A2, Bi, B2, Cl, and C2 polypeptides (2, 3). Several lines of indirect evidence suggest that hnRNPs might be involved in pre-mRNA splicing. Four hnRNPs (Al, C, D, and I/PBT) have been found to bind specifically to the conserved polypyrimidine tract located upstream of most 3' splice sites (4-6). The hnRNPs Al and I/PBT can also associate with 5' splice sites (7-9). The hnRNP Al protein has RNA-annealing activity (10-13) and can bind to the U2 small nuclear ribonucleoprotein (snRNP) (10). Efficient UV crosslinking of hnRNP Al to pre-mRNA requires both Ul and U2 snRNPs (14).Recent in vitro studies provide direct evidence that hnRNP Al might be actively involved in regulating alternative splicing. An excess of hnRNP Al promotes the use of distal 5' splice sites in model pre-mRNAs containing duplicated 5' splice sites (15). This preferential use of distal 5' splice sites can be counteracted by members of the SR protein family (16), such as SF2/ASF and SC35 (15,17,18 In this report, we investigate the role of the Drosophila hnRNP HRB98DE in splicing regulation in living larvae. We tested whether overexpression of HRB98DE affects splice site choice of the endogenous dopa decarboxylase (Ddc) premRNA (28). The Ddc pre-mRNA is expressed primarily in the central nervous system (CNS) and the hypoderm, and it is alternatively spliced in these two tissues (29). The Ddc CNSspecific mRNA contains all four exons, whereas the hypodermal mRNA contains only three exons, skipping the second exon B (see Fig. 2B) (29). Our previous results suggest that the Ddc hypodermal-specific splicing is negatively regulated by a blockage mechanism preventing splicing to exon B and indicate that the sequences of Ddc exon B and the adjacent upstream intron are sufficient for this negative regulation (30,31). Here, we show that in vivo overexpression of a Drosophila hnRNP, HRB98DE, causes profound changes in Ddc splicing.
MATERIALS AND METHODSPlasmid Construction. The cDNAs of Hrb98DE 1A and Hrb98DE 1B, ovl2 and L3 (25), were cloned first into plasmid pBHS (32) and then into the PW8 P-element transformation vector that contai...