We previously reported the immunoaffinity purification of an acetylcholine receptor from chicken brain that did not bind a-bungarotoxin but did bind nicotine and other cholinergic agonists. Antisera and monoclonal antibodies raised against this receptor crossreacted with a receptor from rat brain that had similar pharmacological properties, and also bound to functional acetylcholine receptors in chicken ciliary ganglion cells and rat PC12 cells. Here we report purification of the receptor from rat brain using monoclonal antibody (mAb) 270 raised against receptor from chicken brain. This receptor, similar in size to monomers of receptor from Torpedo electric organ, contained two subunits-apparent Mr, 51,000 and 79,000. The Mr 51,000 subunit was bound by antisera to a subunits of receptor from Torpedo electric organ and by mAb 270, which is specific for the Mr 49,000 subunit analogue of receptor from chicken brain. Both subunits were bound by mAb 286, which also binds both subunits of receptors from chicken brain. Sequence homologies between the four subunits (a, P, y, 5) suggest that they evolved by repeated gene duplication from a primordial subunit. In comparison, little is known about the structure or function of neuronal acetylcholine receptors because of the very small amounts of protein available and the lack of a suitable biochemical probe.a-Bungarotoxin (a-BTX) is a specific probe for receptors in electric organ and muscle, but the physiological significance of a-BTX binding sites found in the nervous system is unclear. a-BTX blocks neuronal acetylcholine receptor function in the cockroach (2), toad, and goldfish (3). However, it has no effect on cholinergic transmission in the rat locus coeruleus (4), the rat pheochromocytoma cell line PC12 (5), or chicken ciliary ganglion neurons (6). a-BTX binding proteins from both chicken (7) and rat (8) brain have been purified. Their immunological crossreaction with receptors from muscle is limited (7) or negligible (9), but the one subunit partially sequenced (7) exhibits some homology to receptor subunits. The histological binding pattern in rat brain of tritiated nicotine or acetylcholine (plus atropine to block muscarinic receptors) is different from the pattern of a-BTX (10).In an attempt to identify a nicotinic receptor that did not bind a-BTX, a cDNA clone from a PC12 library (XPCA48) was identified by low stringency hybridization with fragments of a cDNA clone for a subunits of receptor from mouse muscle by Boulter et al. (11). This cDNA hybridized at low stringency with some brain regions that bind nicotine strongly but bind a-BTX little if at all (12). Complications are that PC12 cells contain both functional receptors and a-BTX binding components, both of which would be expected to have sequence homology with subunits of receptor from muscle, and in situ hybridization localizes RNA in cell bodies, not proteins that might be localized in distant axons and that can also be identified by their ligand binding properties. Also, we have found that nerv...