2000
DOI: 10.1645/0022-3395(2000)086[0537:irsogs]2.0.co;2
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ITS-2 rDNA SEQUENCING OFGNATHOSTOMASPECIES (NEMATODA) AND ELUCIDATION OF THE SPECIES CAUSING HUMAN GNATHOSTOMIASIS IN THE AMERICAS

Abstract: From several gnathostome species the complete internal transcribed spacer ITS-2 ribosomal DNA (rDNA) repeat sequence and a fragment of the 5.8S rDNA were obtained by direct polymerase chain reaction cycle-sequencing and silver-staining methods. The size of the complete ITS-1 sequence in agarose gel electrophoresis was also obtained. The ITS-2 enabled the differentiation of Gnathostoma spinigerum from Thailand and Gnathostoma binucleatum from Mexico and Ecuador and confirmed the validity of the latter. Gnathost… Show more

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Cited by 119 publications
(23 citation statements)
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“…Primers, NEWS2 (forward) 5′-TGTGTCGATGAAGAACGCAG-3′ and ITS2-RIXO (reverse) 5′-TTCTATGCTTAAATTCAGGGG-3′ were used to amplify a 600-bp fragment of the 5.8S rRNA gene and the intergenic transcribed spacer 2 (ITS-2) by using PCR ( 30 ) to corroborate morphologic identifications. Five microliters of the reaction mixture was examined by 1% agarose gel containing 0.0001% Gel Red (Phenix Research Products, Candler, NC, USA) by gel electrophoresis.…”
Section: Methodsmentioning
confidence: 99%
See 1 more Smart Citation
“…Primers, NEWS2 (forward) 5′-TGTGTCGATGAAGAACGCAG-3′ and ITS2-RIXO (reverse) 5′-TTCTATGCTTAAATTCAGGGG-3′ were used to amplify a 600-bp fragment of the 5.8S rRNA gene and the intergenic transcribed spacer 2 (ITS-2) by using PCR ( 30 ) to corroborate morphologic identifications. Five microliters of the reaction mixture was examined by 1% agarose gel containing 0.0001% Gel Red (Phenix Research Products, Candler, NC, USA) by gel electrophoresis.…”
Section: Methodsmentioning
confidence: 99%
“…These sequences were aligned along with 20 sequences of Gnathostoma spp. available on GenBank: G. spinigerum , G. binucleatum , G. hispidum , G. nipponicum , G. miyazakii , G. lamothei , G. doloresi , and G. turgidum from NCBI Database using ClustalW version 5.1 in MEGA ( 30 ) and manually trimmed to remove overhang. Sequences from this study were deposited in GenBank under accession nos.…”
Section: Methodsmentioning
confidence: 99%
“…The primers used were News2 5′-TGT-GTC-GAT-GAA-GAA-CGC-AG-3′ and Its2Rixo 5′-TTC-TAT-GCT-TAA-ATT-CAG-GGG-3′ [3, 6]. The sequences were amplified using a commercial kit (Taq PCR Master Mix, Qiagen) in a total volume of 25 μL (containing 3 mM of MgCl 2 and 400 μM of each dNTP) in a Peltier Thermal Cycler (MJ Research) with an initial denaturation step at 94 °C for 3 min, followed by 40 cycles, each comprising denaturation at 94 °C for 30 s, annealing at 55 °C for 30 s, extension at 72 °C for 45 s, and a final extension step at 72 °C for 5 min.…”
Section: Methodsmentioning
confidence: 99%
“…The primers used for amplification of Fasciola sp. sequences were Fsh1 5′-GAT-CAA-TTC-ACC-CAT-TTC-CGT-TAG-TCC-TAC-3′ and Fsh2 5′-AAA-CTG-GGC-TTA-AAC-GGC-GTC-CTA-CGG-GCA-3′ and for lymnaeids ITS - 2 amplification sequences were News2 5′-TGT-GTC-GAT-GAA-GAA-CGC-AG-3′ and Its2Rixo 5′-TTC-TAT-GCT-TAA-ATT-CAG-GGG-3′ [3, 6]. The sequences were amplified using a commercial kit (Taq PCR Master Mix, Qiagen) in a total volume of 25 μL in a Peltier Thermal Cycler (MJ Research) with an initial denaturation step at 95 °C for 5 min, followed by 40 cycles, each comprising denaturation at 95 °C for 1 min, annealing at 56 °C for 1 min, extension at 72 °C for 1 min, and a final extension step at 72 °C for 10 min.…”
Section: Methodsmentioning
confidence: 99%
“…DNA concentration was measured by spectrophotometer ND-1000 (NanoDrop®) and then the samples were stored at -20°C. PCR was carried out in total volume of 25 μl using PPP Master Mix (Top-Bio), 50 ng of snail template DNA and 1 μl of 10 μM forward primer 5′ - TGT GTC GAT GAA GAA CGC AG – 3′ and reverse primer 5′ - TTC TAT GCT TAA ATT CAG GGG - 3′ specific for 502 bp ITS2 region [32]. …”
Section: Methodsmentioning
confidence: 99%