Jiella endophytica sp. nov., a novel endophytic bacterium isolated from root of Ficus microcarpa Linn. f.

Li, Tuo; Yan, Xiao-Rui; Xiao, Jian‐Hui

doi:10.1007/s10482-019-01274-8

Cited by 11 publications

(14 citation statements)

References 21 publications

Supporting

Mentioning

Contrasting

Order By: Relevance

“…Strain 40Bstr34 T could be differentiated from J. aquimaris and J. endophytica by its much higher proportion of iso-C 17 : 0 3-OH. Q-10 was detected as the principal respiratory quinone in strain 40Bstr34 T , which is in accordance with other members of the genus Jiella [1, 2]. The polar lipid profile of strain 40Bstr34 T was composed of phosphatidylethanolamine, phosphatidylmonomethylethanolamine, diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, two unidentified amino lipids (AL1, AL2) and two unidentified lipids (L1, L2).…”

Section: Full-textsupporting

confidence: 76%

“…At the time of writing, this genus includes two species with validly published names: Jiella aquimaris and Jiella endophytica (https://lpsn.dsmz.de/genus/jiella). Members of the genus Jiella are characterized as Gram-stain-negative, oxidase- and catalase-positive, rod shaped, aerobic, and chemotaxonomically with summed feature 8 (C 18 : 1 ω 6 c and/or C 18 : 1 ω7 c ) and cyclo-C 19 : 0 ω8 c as major cellular fatty acids, with ubiquinone-10 (Q-10) as the major ubiquinone, and by DNA G+C content between 66 and 68 % [1, 2]. Here we describe a novel strain, designated strain 40Bstr34 T , using a polyphasic taxonomic approach.…”

Section: Full-textmentioning

confidence: 99%

“…aquimaris MCCC 1K00255 T (obtained from the MCCC, the Marine Culture Collection of China) [1], J. endophytica CBS5Q-3 T (private gift) [2] and Aurantimonas aggregata KCTC 52919 T (obtained from the KCTC, the Korean Collection for Type Cultures) [3] were used as reference strains. Except where indicated, strain 40Bstr34 T and the three reference strains were routinely cultured on MA at 25 °C and stocks were preserved at −80 °C.…”

Section: Full-textmentioning

confidence: 99%

See 2 more Smart Citations

Jiella pacifica sp. nov., isolated from the West Pacific Ocean

Xue

Zhu

Chen

et al. 2020

International Journal of Systematic and Evolutionary Microbiology

View full text Add to dashboard Cite

A Gram-stain-negative bacterium, designated strain 40Bstr34 T , isolated from a sediment sample from the West Pacific Ocean, was taxonomically characterized by using a polyphasic approach. The strain was phylogenetically close to Jiella aquimaris LZB041 T and Jiella endophytica CBS5Q-3 T , with 16S rRNA gene sequence similarities of 98.5 and 97.1 %, respectively. The genome of strain 40Bstr34 T featured a G+C content of 65.7 % for a 5.8 Mb chromosome. Up-to-date bacterial core gene set analysis revealed that strain 40Bstr34 T represents one independent lineage with J.aquimaris LZB041 T . In silico DNA-DNA hybridization values between strain 40Bstr34 T and its phylogenetic neighbours ranged from 30.3-34.2 %, below the cutoff of 70 %. In addition, the corresponding average nucleotide identity values were between 81.8-83.7 %, which are lower than 95 % threshold. The predominant cellular fatty acids of strain 40Bstr34 T were summed feature 8 (C 18 : 1 ω6c and/or C 18 : 1 ω7c), cyclo-C 19 : 0 ω8c and iso-C 17 : 0 3-OH, and ubiquinone-10 as the predominant respiratory quinone. The major polar lipids included phosphatidylethanolamine, phosphatidylmonomethylethanolamine, diphosphatidylglycerol, phosphatidylglycerol, phosphatidylcholine, two unidentified aminolipids and two unidentified lipids. Based on the results of phenotypic, chemotaxonomic and genetic analyses, strain 40Bstr34 T is identified as representing a novel species of the genus Jiella for which the name Jiella pacifica sp. nov. is proposed. The type strain is 40Bstr34 T (=JCM 33903 T =MCCC 1K04569 T ).

show abstract

Section: Full-textsupporting

confidence: 76%

Section: Full-textmentioning

confidence: 99%

Section: Full-textmentioning

confidence: 99%

See 1 more Smart Citation

Jiella pacifica sp. nov., isolated from the West Pacific Ocean

Xue

Zhu

Chen

et al. 2020

International Journal of Systematic and Evolutionary Microbiology

View full text Add to dashboard Cite

show abstract

“… Jiella aquimaris , Jiella endophytica and Jiella pacifica were isolated from offshore surface seawater [1], root of Ficus microcarpa Linn. f. [2] and surface seawater of the West Pacific Ocean [3], respectively, indicated that members of the genus Jiella were of marine origin. Species affiliated to the genus Jiella have common characteristics.…”

Section: Full-textmentioning

confidence: 99%

“…The polar lipid profile of strain Table 3. Differential characteristics between strains MQZ13P-4 T and the type strains of phylogenetically related species Strains: 1, MQZ13P-4 T ; 2, Jiella endophytica CBS5Q-3 T ; 3, Jiella aquimaris JCM 30119 T [2]. All strains were positive for catalase, oxidase, hydrolysis of Tween 40, urease, acid phosphatase, alkaline phosphatase, esterase, esterase lipase, leucine arylamidase and naphthol-AS-BI-phosphohydrolase.…”

mentioning

confidence: 99%

Jiella sonneratiae sp. nov., a novel endophytic bacterium isolated from bark of Sonneratia apetala

Chen

Huang

et al. 2022

International Journal of Systematic and Evolutionary Microbiology

Self Cite

View full text Add to dashboard Cite

A new endophytic bacterium, designated strain MQZ13P-4T was isolated from Sonneratia apetala collected from Maowei sea Mangrove Nature Reserve in Guangxi Zhuang Autonomous Region, PR China. The 16S rRNA gene sequence similarity between strain MQZ13P-4T and its closest phylogenetic neighbour Jiella endophytica CBS5Q-3T was 97.9 %. Phylogenetic analyses using 16S rRNA gene sequences and whole-genome sequences showed that strain MQZ13P-4T formed a distinct lineage with Jiella endophytica CBS5Q-3T, Jiella pacifica 40Bstr34T and Jiella aquimaris JCM 30119T. The draft genome of strain MQZ13P-4T was 5 153 243 bp in size and its DNA G+C content was 68.1 mol%. Comparative genome analysis revealed that the average nucleotide identity, digital DNA–DNA hybridization and average amino acid identity values among strain MQZ13P-4T and other related species were below the cut-off levels of 95, 70 and 95.5 %, respectively. The cell-wall peptidoglycan of strain MQZ13P-4T contained meso-diaminopimelic acid as the diagnostic diamino acid. The respiratory quinone was Q-10. The major cellular fatty acid was C18 : 1 ω7c. The polar lipids comprised phosphatidylcholine, phosphatidylethanolamine, phosphatidylmonomethylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, two unidentified aminolipids and two unidentified lipids. Strain MQZ13P-4T had a typical chemical compositions of fatty acids, lipids, quinones and diagnostic diamino acid for Jiella species, but could be distinguished from known species of the genus Jiella . Based on polyphasic evidence, strain MQZ13P-4T represents novel species of the genus Jiella , for which the name Jiella sonneratiae sp. nov. is proposed. The type strain is MQZ13P-4T (=CGMCC 1.18727T=JCM 34333T).

show abstract

Jiella avicenniae sp. nov., a novel endophytic bacterium isolated from bark of Avicennia marina

Zhang

Liu

et al. 2022

Arch Microbiol

View full text Add to dashboard Cite

Jiella endophytica sp. nov., a novel endophytic bacterium isolated from root of Ficus microcarpa Linn. f.

Cited by 11 publications

References 21 publications

Jiella pacifica sp. nov., isolated from the West Pacific Ocean

Jiella pacifica sp. nov., isolated from the West Pacific Ocean

Jiella sonneratiae sp. nov., a novel endophytic bacterium isolated from bark of Sonneratia apetala

Jiella avicenniae sp. nov., a novel endophytic bacterium isolated from bark of Avicennia marina

Contact Info

Product

Resources

About