JUICE, software for vegetation classification

Global Ecology and Biogeography

Tichý

et al. 2011

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116

Aim To determine relative effects of habitat type, climate and spatial pattern on species richness and composition of native and alien plant assemblages in central European cities. Location Central Europe, Belgium and the Netherlands. Methods The diversity of native and alien flora was analysed in 32 cities. In each city, plant species were recorded in seven 1‐ha plots that represented seven urban habitat types with specific disturbance regimes. Plants were classified into native species, archaeophytes (introduced before ad 1500) and neophytes (introduced later). Two sets of explanatory variables were obtained for each city: climatic data and all‐scale spatial variables generated by analysis of principal coordinates of neighbour matrices. For each group of species, the effect of habitat type, climate and spatial variables on variation in species composition was determined by variation partitioning. Responses of individual plant species to climatic variables were tested using a set of binomial regression models. Effects of climatic variables on the proportion of alien species were determined by linear regression. Results In all cities, 562 native plant species, 188 archaeophytes and 386 neophytes were recorded. Proportions of alien species varied among urban habitats. The proportion of native species decreased with increasing range and mean annual temperature, and increased with increasing precipitation. In contrast, proportions of archaeophytes and neophytes increased with mean annual temperature. However, spatial pattern explained a larger proportion of variation in species composition of the urban flora than climate. Archaeophytes were more uniformly distributed across the studied cities than the native species and neophytes. Urban habitats rich in native species also tended to be rich in archaeophytes and neophytes. Main conclusions Species richness and composition of central European urban floras are significantly affected by urban habitat types, climate and spatial pattern. Native species, archaeophytes and neophytes differ in their response to these factors.

Section: Discussionmentioning

confidence: 99%

“…The last category included species from Africa, Australia and New Zealand, species of uncertain origin, hybrids and recent cultigens. The data set was edited using the program juice 9 (Tichý, 2002).…”

Section: Species Datamentioning

confidence: 99%

Native and alien floras in urban habitats: a comparison across 32 cities of central Europe

Lososová

Global Ecology and Biogeography

Tichý

et al. 2011

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116

“…Sample-based rarefaction curves (Gotelli & Colwell, 2001), calculated according to the analytical formula published by Colwell et al (2004), were used to compare species richness of the studied species groups. This calculation was performed using the juice program, version 7 (Tichý, 2002).…”

Section: Discussionmentioning

confidence: 99%

Dispersal limitation is stronger in communities of microorganisms than macroorganisms across Central European cities

Journal of Biogeography

Lososová

Horsák

et al. 2011

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Aim It is generally believed that communities of small organisms, or those with small propagules, are structured mainly by local niche‐based processes, and less by dispersal limitation. Conversely, weaker environmental and stronger spatial structure, indicating dispersal limitation, are expected to occur more frequently in communities of large organisms. However, this hypothesis has rarely been tested by comparing spatial and environmental effects across groups of organisms of different size (or with different size of propagules) sampled at the same set of sites. Here, we test it in urban environments. Location Thirty‐two cities in 10 countries of Central Europe and Benelux. Methods We compared effects of spatial location and climate on species composition of different groups of organisms sampled in corresponding types of urban habitats. The studied groups were: (1) subaerial cyanobacteria and algae, (2) vascular plants, (3) land snails; and subgroups of vascular plants with different life form and dispersal mode, namely: (4) herbs, (5) animal‐dispersed trees and shrubs, and (6) wind‐dispersed trees and shrubs. Data were analysed by variation partitioning based on redundancy analysis (RDA) with principal coordinates of neighbour matrices (PCNM). Eighteen PCNM eigenvectors (expressing spatial effects) and mean annual temperature, July–January temperature difference and annual precipitation sum (expressing environmental effects) were used as explanatory variables. Results Pure effects of climate on species composition, indicating niche‐based processes, were not significant for any group or subgroup of the studied organisms. In contrast, pure effects of space, indicating dispersal limitation, were significant for all groups and subgroups except herbs. Surprisingly, the community of cyanobacteria/algae possessed much stronger spatial structure independent of climate than communities of larger organisms, although cyanobacteria/algae had the lowest beta diversity among the studied cities. Main conclusions We hypothesize that the community of subaerial cyanobacteria/algae is structured by natural processes which involve dispersal limitation, whereas communities of urban plants and snails are influenced by human‐assisted dispersal of their propagules between cities, which results in weaker dispersal limitation. Our study indicates that dispersal vectors can be more important for community structure than size of organisms or of their propagules.

“…In addition to the phi coefficient, the probability of the observed species occurrence pattern under random distribution of species occurrences across vegetation types was calculated for each combination of species and vegetation type using Fisher's exact test. These calculations, as well as editing of vegetation plot data, were performed using the JUICE 7 program (Tichý 2002).…”

Section: Discussionmentioning

confidence: 99%

Vegetation change in Southeast Greenland? Tasiilaq revisited after 40 years

Daniëls

Molenaar²,

Applied Vegetation Science

et al. 2010

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Questions: Are there changes in species composition of the oceanic, Low‐Arctic tundra vegetation after 40 years? Can possible changes be attributed to climate change? Location: Ammassalik Island near Tasiilaq, Southeast Greenland. Methods: Species composition and cover of 11 key vegetation types were recorded in 110 vegetation survey plots in 1968–1969 and in 11 permanent plots in 1981. Recording was repeated in 2007. Temporal changes in species composition and cover between the surveys were tested using permutation tests linked with constrained ordinations for vegetation types, and Mann–Whitney tests for individual species. Changes in vegetation were related to climate change. Results: Although climate became warmer over the studied period, most of the vegetation types showed minor changes. The changes were most conspicuous in mire and snowbed vegetation, such as the Carex rariflora mire and Hylocomium splendens snowbed. In the C. rariflora mire, species number and cover of vascular plants and cover of bryophytes increased, whereas in the H. splendens snowbed species numbers of vascular plants, bryophytes, and also lichens increased. Lichen richness increased in the Carex bigelowii snowbed and cover of bryophytes in the Salix herbacea snowbed. No such changes occurred in the Alchemilla glomerulans meadow, Alchemilla alpina snowbed and Phyllodoce coerulea heath. There was no change of species composition within the Salix glauca scrub, A. alpina snowbed, lichen grassland and the Empetrum nigrum and Phyllodoce coerulea heaths. Most changes resulted from increasing frequency or cover of some species; there were very few decreasing species. Most of the increasing species indicate drier substrate conditions. Conclusions: Only minor changes in species composition and cover were detected in the vegetation types studied. These changes were probably caused by milder winters and warmer summers during the years before the 2007 sampling. Climate warming may have reduced the duration of snow cover and soil moisture, particularly in snowbed and mire habitats, where species composition change was most pronounced. However, its magnitude was insufficient to cause a major change in species composition. Thus, on the level of plant community types, tundra vegetation near Tasiilaq was rather stable over the last 40 years.