Encapsulins, self-assembling
icosahedral protein nanocages derived
from prokaryotes, represent a versatile set of tools for nanobiotechnology.
However, a comprehensive understanding of the mechanisms underlying
encapsulin self-assembly, disassembly, and reassembly is lacking.
Here, we characterize the disassembly/reassembly properties of three
encapsulin nanocages that possess different structural architectures: T = 1 (24 nm), T = 3 (32 nm), and T = 4 (42 nm). Using spectroscopic techniques and electron
microscopy, encapsulin architectures were found to exhibit varying
sensitivities to the denaturant guanidine hydrochloride (GuHCl), extreme
pH, and elevated temperature. While all three encapsulins showed the
capacity to reassemble following GuHCl-induced disassembly (within
75 min), only the smallest T = 1 nanocage reassembled
after disassembly in basic pH (within 15 min). Furthermore, atomic
force microscopy revealed that all encapsulins showed a significant
loss of structural integrity after undergoing sequential disassembly/reassembly
steps. These findings provide insights into encapsulins’ disassembly/reassembly
dynamics, thus informing their future design, modification, and application.