Pore-filling hydrates are the main occurrence forms of marine gas hydrates. Pore characteristics are a vital factor affecting the thermodynamic properties of hydrates and their distribution in sediments. Currently, the characterization of the pore system for hydrate-bearing reservoirs are little reported. Therefore, this paper focuses on the Krishna-Godavari Basin, via various methods to characterize the hydrate-bearing sediments in the region. The results showed that X-ray diffraction (XRD) combined with scanning electron microscopy (SEM) and cast thin section (CTS) can better characterize the mineral composition in the reservoir, high-pressure mercury injection (HPMI) focused on the contribution of pore size to permeability, constant-rate mercury injection (CRMI) had the advantage of distinguishing between the pore space and pore throat, and nuclear magnetic resonance cryoporometry (NMRC) technique can not only obtain the pore size distribution of nanopores with a characterization range greater than nitrogen gas adsorption (N2GA), but also quantitatively describe the trend of fluids in the pore system with temperature. In terms of the pore system, the KG Basin hydrate reservoir develops nanopores, with a relatively dispersed mineral distribution and high content of pyrite. Rich pyrite debris and foraminifera-rich paleontological shells are observed, which leads to the development of intergranular pores and provides more nanopores. The pore throat concentration and connectivity of the reservoir are high, and the permeability of sediments in the same layer varies greatly. The reason for this phenomenon is the significant difference in average pore radius and pore size contribution to pore permeability. This article provides a reference and guidance for exploring the thermodynamic stability of hydrates in sediments and the exploration and development of hydrates by characterizing the pores of hydrate reservoirs.