& Varshavsky (1984) found three conserved sites per repeat. These sites could play a role in the molecular organization of satellites such as in nucleosome-positioning, i.e. in the formation of higher order chromatin structures. However, these effects have, if any, little to do with functions in an evolutionary sense (see Maynard Smith's (1982) discussion of this problem).
ConclusionsThe picture on the evolutionary accumulation of satellite DNA emerging from the present analysis is thus as follows. Accumulation of HRDNA clusters in higher organisms is possible even if these sequences are of no functional significance or slightly deleterious. The occurrence of long stretches of satellite DNA can most readily be explained as a consequence of synergistic effects of several inherent molecular forces and natural selection. Satellite DNA is located preferentially in the neighbourhood of centromeres and telomeres, due to these structures having been selected for restricted rates of crossing over. The HRDNA sequences which accumulate are subject to certain constraints with respect to sequence composition. Constraints are imposed by the molecular self-organization of these sequences rather than by a possible functional role. To conclude, the production of HRDNA due to errors in replication and its accumulation during evolution do not provide a case against the well grounded assumption that biological systems operate at or close to their optimum efficiency. This is because there are forces that are very effective at stemming the amplification of sequences when required. Due to the control mechanisms showing nonlinear characteristics, the organization of satellite DNAs in the chromosomes is such that they cannot interfere with functions that are lively for the organisms.I want to thank Prof. Jurgen Brickmann for his valuable suggestions for improving the presentation, and Dr. Charles H. Langley for drawing Lewontin's paradox to my attention.
References[I] R.
Biophysical Chemistry 1 Catalysis / Chemical Kinetics J MembranesThe kinetics of proton-transport-coupled ATP synthesis catalyzed by the chloroplast ATPase (ATP synthase) was investigated after energization of the membrane by an artificially generated ApH and an electric potential difference, Ay. With a rapid mixing system, ATP synthesis was studied at short reaction times (<200 ms) where all relevant parameters (pH,,,, pHin, Ay, substrate and product concentrations) remain practically constant at their initial values. The reaction is investigated at three levels of complexity. (1) The ATPase is embedded in the natural membrane. (2) The ATPase is isolated, purified and reconstituted into asolectin liposomes. (3) The reconstituted ATPase is investigated under single site, single turnover conditions. The following results were obtained:Bcr. Bunsenges. Phys. Chem. 90, 1034-1040 (1986) -0 VCH Verlagsgesellschaft mbH, D-6940 Weinheim, 1986. 0005-9021/~6/1111--10~4 x 03 w n