Globally, the production of Pekin ducks for meat and eggs is considerable, with an estimated >200 million ducks slaughtered yearly for their meat in the United States and the European Union alone. However, despite the size of the Pekin duck industries, there is a lack of research-based guidance regarding the welfare of the ducks. The purpose of this systematic review is to examine and summarize available scientific literature related to the welfare of Pekin ducks raised on commercial farms for meat and eggs. Specifically, we aimed to identify topics where sufficient literature exists to support best-practice duck welfare recommendations, as well as further research needs. The literature search targeted original research papers and review articles published in English. Six pre-establish inclusion/exclusion criteria were applied, yielding 63 publications. We summarized their content based their main topic of focus. For all original studies, we additionally recorded the country where the study was executed, scale of the project (commercial or experimental barns), general information about the housing system and management (waterers, flooring, ventilation, group size, and space allowance), and the types of outcome variables collected. We begin with an overview of key publication trends. We then synthesize and discuss welfare outcomes related to key housing/management decisions: bathing water, flooring and litter, stocking density and space availability, ventilation/air quality, lighting, outdoor access, and for egg laying birds the availability of nest boxes. Throughout, we outline specific research gaps, as well as overarching research needs.