Survivin is a drug target and the survivin suppressant YM155 a drug candidate for high-risk neuroblastoma. Findings from one YM155-adapted subline of the neuroblastoma cell line UKF-NB-3 had suggested that increased ABCB1 (mediates YM155 efflux) levels, decreased SLC35F2 (mediates YM155 uptake) levels, decreased survivin levels, and TP53 mutations indicate YM155 resistance. Here, the investigation of ten additional YM155-adapted UKF-NB-3 sublines only confirmed the roles of ABCB1 and SLC35F2. However, cellular ABCB1 and SLC35F2 levels did not indicate YM155 sensitivity in YM155-naïve cells, as indicated by drug response data derived from the Cancer Therapeutics Response Portal (CTRP) and the Genomics of Drug Sensitivity in Cancer (GDSC) databases. Moreover, the resistant sublines were characterised by a remarkable heterogeneity. Only seven sublines developed ontarget resistance as indicated by resistance to RNAi-mediated survivin depletion. The sublines also varied in their response to other anti-cancer drugs. In conclusion, cancer cell populations of limited intrinsic heterogeneity can develop various resistance phenotypes in response to treatment. Therefore, individualised therapies will require monitoring of cancer cell evolution in response to treatment. Moreover, biomarkers can indicate resistance formation in the acquired resistance setting, even when they are not predictive in the intrinsic resistance setting.
Results
YM155-adapted UKF-NB-3 sublines display pronounced YM155 resistanceRepresentative photos of the morphology of the project cell lines are presented in Figure S1 and the doubling times in Table S1. All YM155-adapted UKF-NB-3 sublines displayed pronounced YM155 resistance (Figure 1, Table S1). The relative resistance expressed as fold change of the YM155 IC50 values in the YM155-adapted UKF-NB-3 sublines divided by the YM155 IC50 value in UKF-NB-3 (IC50: 0.55nM) ranged between 38 (UKF-NB-3 r YM155 20nM IV; IC50: 21.0nM) and 76 (UKF-NB-3 r YM155 20nM VI; IC50: 41.9nM) ( Table S1). The fold changes of the YM155 IC90 values in the YM155-adapted UKF-NB-3 sublines relative to the YM155 IC90 value in UKF-NB-3 (IC90: 1.01nM) ranged from 30 (UKF-NB-3 r YM155 20nM IV; IC90: 29.8nM) to 135 (UKF-NB-3 r YM155 20nM VI; IC90: 136nM) ( Table S1).
The cellular TP53 status is not a reliable indicator of YM155 sensitivityOriginally, the cellular TP53 status was described to not directly influence the anti-cancer action of YM155 [30]. In agreement, the analysis of the Genomics of Drug Sensitivity in Cancer (GDSC) and Cancer Therapeutics Response Portal (CTRP) databases did not indicate differences in YM155 sensitivity between cell lines in dependence on their TP53 status (wild-type or mutant) ( Figure 2). However, the activation of p53 signalling seems to be involved in the anticancer mechanism of action of YM155 at least in some cancer cells. We have previously shown in neuroblastoma cells that YM155 activates p53 signalling, that p53 activation using MDM2 inhibitors enhances the YM155 effects, and that p53 deple...