2013
DOI: 10.1111/wre.12064
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Large‐scale identification of microsatellites for a major invasive weed, Ageratina adenophora, using the Illumina sequencing technology

Abstract: Microsatellites were identified and characterised for a worldwide invasive weed, Ageratina adenophora, based on the Illumina sequencing technology. Using the assembled genomic sequences obtained from the Illumina GAII sequencing platform, a total of 3012 microsatellites were identified, of which mono-, di-, tri-, tetra-, penta-, and hexa-nucleotide repeats were 181 (6.0%), 1379 (45.8%), 1064 (35.3%), 220 (7.3%), 73 (2.4%) and 95 (3.2%) respectively. The AC/GT and GAT/ATC motifs were the most frequent motif typ… Show more

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Cited by 3 publications
(2 citation statements)
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“…King and H. Rob., native to central Mexico, is one of the most problematic invasive alien plant species of the family Asteraceae (Nie et al ., ). It is one of the most invasive plants in many parts of Europe, Australia, Africa and Asia (Cronk & Fuller, ; Wang & Wang, ; Heystek et al ., ).…”
Section: Introductionmentioning
confidence: 97%
“…King and H. Rob., native to central Mexico, is one of the most problematic invasive alien plant species of the family Asteraceae (Nie et al ., ). It is one of the most invasive plants in many parts of Europe, Australia, Africa and Asia (Cronk & Fuller, ; Wang & Wang, ; Heystek et al ., ).…”
Section: Introductionmentioning
confidence: 97%
“…However, the application of NGS in weed species is lagging behind that in model plants and crop species. 5 To date, no complete genome has been assembled from any weed species, and only a small number of publications have reported the use of NGS for assembly and analysis of transcriptome or chloroplast genome, 6 -9 for marker development 7,8,10,11 and for addressing herbicide/pesticide resistance problems in weed species. 12 -14 Poa annua is one of the most widespread grass species worldwide.…”
Section: Introductionmentioning
confidence: 99%