The interaction between fish and plants is vital for the dynamics of ecosystems since it influences plant distribution and regeneration patterns. In the floodable areas of the Amazon, these interactions are mainly structured by the flood pulse, which enables seed dispersal via water (hydrochory) and fish (ichthyochory), and which contributes to the formation of complex mutualistic networks. Our study evaluated the structure (modularity, nestedness, specialisation, and robustness) of the network of dispersal of seeds by frugivorous fish in a floodplain forest in Central Amazonia. We expect the binary network to have a nested pattern, while the weighted network is expected to have a non‐nested structure; that generalist frugivorous species should constitute the core of the network, while specialist frugivorous species will be peripheral; that the size of fish and seeds is related to specialisation, and that the robustness of the network weakens as generalist frugivorous fish are removed. We found 5012 intact seeds from 49 plant species in the digestive tracts of 11 species of frugivorous fish. A nested and modular pattern was found for the binary and weighted networks, albeit with a low degree of nestedness. Our network proved relatively robust when the frugivores were removed, whereby all the fish and plant species became peripheral. No relationship was found between the size of the fish and the seeds and the degree of specialisation. Considering the anthropogenic impacts that can cause modifications in seed dispersal networks, knowing the structure of mutualistic networks is fundamental in order to be able infer the vulnerability of the interactions as a result of changes in the ecosystem.