The microbial communities that inhabit the laryngeal mucosa build stable microenvironments and have the potential to influence the health of the human throat. However, the associations between the microbiota structure and laryngeal carcinoma remain uncertain. Here, we explored this question by comparing the laryngeal microbiota structure in laryngeal cancer patients with that in control subjects with vocal cord polyps through high-throughput pyrosequencing. Overall, the genera Streptococcus, Fusobacterium, and Prevotella were prevalent bacterial populations in the laryngeal niche. Tumor tissue samples and normal tissues adjacent to the tumor sites (NATs) were collected from 31 laryngeal cancer patients, and the bacterial communities in laryngeal cancer patients were compared with control samples from 32 subjects. A comparison of the laryngeal communities in the tumor tissues and the NATs showed higher α-diversity in cancer patients than in control subjects, and the relative abundances of seven bacterial genera differed among the three groups of samples. Furthermore, the relative abundances of ten bacterial genera in laryngeal cancer patients differed substantially from those in control subjects. These findings indicate that the laryngeal microbiota profiles are altered in laryngeal cancer patients, suggesting that a disturbance of the microbiota structure might be relevant to laryngeal cancer.The human microbiota can be considered an organ composed of mixed species with functions that enable the construction of a polymicrobial assemblage 1, 2 . Microbial communities are abundant and relatively stable in the human body, which is constantly exposed to these microbial factors, and these communities play a fundamental role in regulating the health and physiology of the host via cooperative and competitive interactions [3][4][5] . Indeed, aberrations in the microbiota profiles play causative roles in the development of many clinical diseases, such as periodontitis, obesity, inflammatory bowel disease, diabetes mellitus, metabolic syndrome, atherosclerosis, and liver cirrhosis [6][7][8][9][10][11][12] . Specifically, differences in the relative abundance of certain microbial communities have been observed in cancer patients, indicating that disturbances in this multispecies synergy might be an important factor related to tumorigenesis [13][14][15] . Recently, the use of animal models possessing the same molecular pathway mechanisms observed in vivo has suggested that disruption of the microbiota can promote tumor initiation and development [16][17][18] . However, the mechanisms through which microbial factors influence susceptibility to laryngeal carcinoma remain elusive. Laryngeal carcinoma is one of the most common malignancies of the head and neck, and squamous cell carcinoma is the most frequent histological type of laryngeal carcinoma, accounting for 98% of cases 19,20 . The main risk factors for this cancer include tobacco smoking and alcohol consumption, and the roles of these risk factors have been consistentl...