Launching Your VR Neuroscience Laboratory

Wu, Ying Choon; Maymon, Christopher; Paden, Jonathon Dean; Liu, Weichen

doi:10.1007/7854_2023_420

Cited by 3 publications

(1 citation statement)

References 25 publications

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“…A recent Google Scholar query for "Blender Model" returned more than 200,000 results from diverse fields. The use of VR is making substantial inroads in the neuroanatomical studies 13,[29][30][31] . Applying VR to analyze dendritic spines is relatively novel, and will continue to evolve.…”

Section: Discussionmentioning

confidence: 99%

A Novel, Open-Source Virtual Reality Platform for Dendritic Spine Analysis

Reimer,

Kauer,

Benson

et al. 2024

Preprint

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SummaryNeuroanatomy is fundamental to understanding the nervous system, particularly dendritic spines, which are vital for synaptic transmission and change in response to injury or disease. Advancements in imaging have allowed for detailed 3D visualization of these structures. However, existing tools for analyzing dendritic spine morphology are limited. To address this, we developed an open-source, virtual reality (VR) Structural Analysis Software Ecosystem (coined “VR-SASE”) that offers a powerful, intuitive approach for analyzing dendritic spines. Our validation process confirmed the method’s superior accuracy, outperforming recognized gold standard neural reconstruction techniques. Importantly, the VR-SASE workflow automatically calculates key morphological metrics such as dendritic spine length, volume, and surface area, and reliably replicates established datasets from published dendritic spine studies. By integrating the Neurodata Without Borders (NWB) data standard and DataJoint, VR-SASE also aligns with FAIR principles--guidelines aimed at improving the findability, accessibility, interoperability, and reusability of digital assets--enhancing data usability and longevity in neuroscience research.MotivationTechnological limitations of available image-analysis tools for analyzing 3D fine-structure hinders effective research and is often costly. An accessible and efficient solution is crucial to overcome these research challenges. We addressed this by integrating the NWB data standard and DataJoint technology into an open-source, virtual reality workflow, enhancing dendritic spine analysis.

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Section: Discussionmentioning

confidence: 99%

A Novel, Open-Source Virtual Reality Platform for Dendritic Spine Analysis

Reimer,

Kauer,

Benson

et al. 2024

Preprint

View full text Add to dashboard Cite

show abstract

A FAIR, open-source virtual reality platform for dendritic spine analysis

Reimer,

Kauer,

Benson

et al. 2024

Patterns

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Metaverse

Sindiramutty,

Jhanjhi,

Ray

et al. 2023

Advances in Medical Technologies and Clinical Practice

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The rise of the metaverse as a digital domain for diverse activities has birthed an innovative application known as ‘metaverse virtual meditation.' This concept seamlessly merges technology and mindfulness, employing virtual reality (VR) and augmented reality (AR) to craft serene digital landscapes. These immersive settings, ranging from natural vistas to abstract spaces, enable users to overcome physical constraints and distractions, facilitating mindfulness, stress reduction, and emotional resilience. The chapter navigates the fusion of technology and contemplative practices, from traditional meditation to modern VR and AR experiences. Stress reduction, heightened focus, and inclusivity are among the advantages highlighted. The convergence of visuals, biofeedback, brain-computer interfaces (BCIs), and AI-driven personalization is explored for tailored meditation. Design principles, interactive elements, and natural components play a crucial role in shaping tranquil virtual environments.

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Launching Your VR Neuroscience Laboratory

Cited by 3 publications

References 25 publications

A Novel, Open-Source Virtual Reality Platform for Dendritic Spine Analysis

A Novel, Open-Source Virtual Reality Platform for Dendritic Spine Analysis

A FAIR, open-source virtual reality platform for dendritic spine analysis

Metaverse

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