a b s t r a c tThe base-excision repair process protects genomes by removing and replacing altered bases in DNA. Two analogous glycosylases, oxoguanine glycosylase (OGG) and formamidopyrimidine glycosylase (FPG), can start the process by removing oxidized guanine, the most common modification that leads to misreading of DNA. Plants possess genes for both types of glycosylases. We have tested the hypothesis that the two enzymes in plants have diverged in their specificities by inserting the genes for each enzyme from Arabidopsis thaliana L. into Escherichia coli strains designed to indicate the frequencies of the six possible single-base changes. Both enzymes retain the ability to reduce the rate of GC ? TA transversion mutations. Both enzymes also reduce the frequency of two other base-change mutations, GC ? AT and AT ? TA. We do not find a divergence in the repair capabilities of the two enzymes, as measured in E. coli, although surprisingly FPG appears to increase the rate of mutations in one particular strain.Ó 2010 Elsevier Inc. All rights reserved.
IntroductionModification of bases in DNA is a common occurrence in cells and one with potentially serious mutagenic consequences. One of the most common modifications is oxidation of guanine. 7,8-Dihydro-8-oxoguanine (8-oxo-G) base-pairs equally well with cytosine and adenine, leading to GC ? TA transversions. Virtually all organisms have a glycosylase that recognizes and removes 8-oxo-G from DNA, leading to its replacement by unmodified G through the subsequent reactions of the base-excision repair pathway. In archaea, fungi, and animals, the effective glycosylase is oxoguanine glycosylase (OGG); in bacteria, it is formamidopyrimidine glycosylase (FPG). Plants, uniquely, have genes for both enzymes. Furthermore, plant cells have variants of the mRNA for FPG produced by alternative splicing [1,2].The reason for the retention in plants of the genes for both OGG and FPG and the diversity of FPG variants is not known. It is reasonable to speculate that the presence of photosynthetic metabolism, with the resulting high concentration of diatomic oxygen and oxygen radicals, creates a particular need for protection of the genome against oxidative damage. However, knock-out mutants that lack genes for either OGG or FPG, or both, show no obvious phenotype over several generations [3], so the adaptive value of the genes must be subtle or important under unusual circumstances that have not yet been identified. It is also possible that the presence of two analogous genes has allowed one or both to alter the specificity of their protein products, allowing them to recognize additional base modifications. It is known that the glycosylases can have multiple specificities. Bacterial FPG was first shown to act on ring-opened purines [4].To test the specificities of the plant enzymes, we have inserted cDNAs for OGG and FPG from Arabidopsis thaliana into Escherichia coli strains, devised by Cupples and Miller [5] to test for single-base substitution mutations, in which the endogeno...