Against the backdrop of climate change, soil loss, and water scarcity, sustainable food production is a pivotal challenge for humanity. As the global population grows and urbanization intensifies, innovative agricultural methods are crucial to meet rising food demand, while mitigating environmental degradation. Hydroponic and aquaponic systems, has emerged as one of these solutions by minimizing land use, reducing water consumption, and enabling year-round crop production in urban areas. This study aimed at assessing the yield, ecophysiological performance, and nutritional content of Lactuca sativa L. and Cichorium endivia L. var. crispum grown in hydroponic and aquaponic floating raft systems, with Oreochromis niloticus L. integrated into the aquaponic system. Both species exhibited higher fresh biomass and canopy/root ratios in hydroponics compared to aquaponics. Additionally, hydroponics increased the leaf number in curly endive by 18%. Ecophysiological parameters, such as the leaf net photosynthesis rate, actual yield of PSII, and linear electron transport rate, were also higher in hydroponics for both species. However, the nutritional profiles varied between the two cultivation systems and between the two species. Given that standard fish feed often lacks sufficient potassium levels for optimal plant growth, potassium supplementation could be a viable strategy to enhance plant development in aquaponic systems. In conclusion, although aquaponic systems may demonstrate lower productivity compared to hydroponics, they offer a more sustainable and potentially healthier product with fewer harmful compounds due to the reduced use of synthetic fertilizers, pesticides, and the absence of chemical residue accumulation. However, careful system management and monitoring are crucial to minimize potential contaminants.