2The regulated turnover of synaptic vesicle (SV) proteins is thought to involve the ubiquitin 3 dependent tagging and degradation through endo-lysosomal and autophagy pathways. Yet, it remains 4 unclear which of these pathways are used, when they become activated and whether SVs are cleared 5 en-mass together with SV proteins or whether both are degraded selectively. Equally puzzling is how 6 quickly these systems can be activated and whether they function in real time to support synaptic 7 health. To address these questions, we have developed an imaging based system that simultaneously 8 tags presynaptic proteins while monitoring autophagy. Moreover, by tagging SV proteins with a light 9 activated reactive oxygen species (ROS) generator, Supernova, it was possible to temporally control 10 the damage to specific SV proteins and assess their consequence to autophagy mediated clearance 11 mechanisms and synaptic function. Our results show that, in mouse hippocampal neurons, presynaptic 12 autophagy can be induced in as little as 5-10 minutes and eliminates primarily the damaged protein 13 rather than the SV en-mass. Importantly, we also find that autophagy is essential for synaptic function,
14as light-induced damage to e.g. Synaptophysin only compromises synaptic function when autophagy is 15 simultaneously blocked. These data support the concept that presynaptic boutons have a robust highly 16 regulated clearance system to maintain not only synapse integrity, but also synaptic function. 17 18 Significance Statement 19 20 The real-time surveillance and clearance of synaptic proteins is thought to be vital to the health, 21 functionality and integrity of vertebrate synapses and is compromised in neurodegenerative 22disorders, yet the fundamental mechanisms regulating these systems remain enigmatic. Our analysis 23 reveals that presynaptic autophagy is a critical part of a real-time clearance system at glutamatergic 24 synapses capable of responding to local damage of synaptic vesicle proteins within minutes and to be 25 critical for the ongoing functionality of these synapses. These data indicate that synapse autophagy is 26 2 not only locally regulated but also crucial for the health and functionality of vertebrate presynaptic 27 boutons. 28 29 75 Moreover, the selective damage of SV proteins allowed us to show that presynaptic autophagy is 76 critical for the real-time maintenance of synaptic transmission. 77 78 79 80 5 Material and Methods 81 82 Construction of vectors: Monitoring of autophagy within presynaptic boutons was achieved by creating 83 a set of lentiviral expression vectors. All vectors are based on the commercially available vector FUGW 84 (Addgene). In order to co-express mCherry-tagged Synaptophysin (Syp) and eGFP-LC3, 85 Synaptophysin-mCherry (Synaptophysin, NM_012664.3) was synthesized by Eurofins Genomics with a 86 downstream glycine linker that was fused to a self-cleaving 2A peptide (Kim et al., 2011). This element 87 was then exchanged with GFP in the FUGW vector by ligation. Subsequently, t...