Soft
biomaterials possessing structural hierarchy have growing
applications in lab-on-chip devices, artificial tissues, and micromechanical
and chemomechanical systems. The ability to integrate sets of biomolecules,
specifically DNA, within hydrogel substrates at precise locations
could offer the potential to form and modulate complex biochemical
processes with DNA-based molecular switches in such materials and
provide a means of creating dynamic spatial patterns, thus enabling
spatiotemporal control of a wide array of reaction-diffusion phenomena
prevalent in biological systems. Here we develop a means of photopatterning
two-dimensional DNA-functionalized poly(ethylene glycol) diacrylate
(PEGDA) hydrogel architectures with an aim toward these applications.
While PEGDA photopatterning methods are well-established for the fabrication
of hydrogels, including those containing oligonucleotides, the photoinitiators
typically used have significant crosstalk with many UV-photoswitchable
chemistries including nitrobenzyl derivatives. We demonstrate the
digital photopatterning of PEGDA-co-DNA hydrogels
using a blue light-absorbing (470 nm peak) photoinitiator system and
macromer comprised of camphorquinone, triethanolamine, and poly(ethylene
glycol) diacrylate (M
n = 575) that minimizes
absorption in the UV-A wavelength range commonly used to trigger photoswitchable
chemistries. We demonstrate this method using digital maskless photolithography
within microfluidic devices that allows for the reliable construction
of multidomain structures. The method achieves feature resolutions
as small as 25 μm, and the resulting materials allow for lateral
isotropic bulk diffusion of short single-stranded (ss) DNA oligonucleotides.
Finally, we show how the use of these photoinitiators allows for orthogonal
control of photopolymerization and UV-photoscission of acrylate-modified
DNA containing a 1-(2-nitrophenyl) ethyl spacer to selectively cleave
DNA from regions of a PEGDA substrate.