1999
DOI: 10.1103/revmodphys.71.1085
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Linear scaling electronic structure methods

Abstract: Methods exhibiting linear scaling with respect to the size of the system, so called O(N) methods, are an essential tool for the calculation of the electronic structure of large systems containing many atoms. They are based on algorithms which take advantage of the decay properties of the density matrix. In this article the physical decay properties of the density matrix will first be studied for both metals and insulators. Several strategies to construct O(N) algorithms will then be presented and critically ex… Show more

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Cited by 1,359 publications
(1,226 citation statements)
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References 154 publications
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“…167 On the basis of eqs 5 and 6, a variety of hierarchical wavelet bases have been developed. 111,115,117,[142][143][144][145] Here, we expand the multidimensional, positive semidefinite TDDS function as a multiconfigurational (sum-of-products) expansion of Haar scaling functions where the Haar scaling function, H(x), is a square function equal to 1, for 0 e x e 1, and zero otherwise. The quantity N GEN is the number of wavelet generations, and the underline below the summations is meant to indicate that there are N Dim summations, [j 1 ,j 2 , ..., j NDim ], and c i,{j} implies that the coefficients depend on i and the entire set of j-indices.…”
Section: Computational Algorithms For Quantum Wavepacket Ab Initmentioning
confidence: 99%
“…167 On the basis of eqs 5 and 6, a variety of hierarchical wavelet bases have been developed. 111,115,117,[142][143][144][145] Here, we expand the multidimensional, positive semidefinite TDDS function as a multiconfigurational (sum-of-products) expansion of Haar scaling functions where the Haar scaling function, H(x), is a square function equal to 1, for 0 e x e 1, and zero otherwise. The quantity N GEN is the number of wavelet generations, and the underline below the summations is meant to indicate that there are N Dim summations, [j 1 ,j 2 , ..., j NDim ], and c i,{j} implies that the coefficients depend on i and the entire set of j-indices.…”
Section: Computational Algorithms For Quantum Wavepacket Ab Initmentioning
confidence: 99%
“…A nice review of this field has been given by Goedecker. 41 Specific applications to protein systems have mostly been limited to semiempirical methods and include those by Yang, York, and coworkers, 42 by Merz and coworkers, 43 and by Gready and coworkers. 44 Although linear-scaling algorithms permit extended systems to be studied with QM methods, they have the disadvantage at present that they only become competitive with the traditional methods for relatively large numbers of atoms.…”
Section: Quantum Mechanical Methodsmentioning
confidence: 99%
“…A number of codes, such as ONETEP, 1 CONQUEST, 2 SIESTA, 3 OPENMX, 4 Ergo, 5 CP2K 6 and BigDFT, 7 have been developed with calculations of this scale in mind, many of them based on linear-scaling formulations of density functional theory (LS-DFT). [8][9][10][11] However, such large numbers of atoms mean that the complexity of any technique requiring configurational sampling (eg geometry optimisation, ab initio molecular dynamics, metadynamics etc) rapidly increases. The only way to utilise these methods at the scale of thousands of atoms is to take advantage of the massive parallelism made available by recent developments in high performance computing (HPC).…”
Section: Introductionmentioning
confidence: 99%
“…Simultaneously, the number of nodes available in state-of-the-art clusters is continuously increasing. ONETEP 1 is a software package implementing linear-scaling density functional theory 8,11,14 to calculate total energies, forces, and a range of other properties of systems of hundreds up to tens of thousands of atoms. 15,16 The linear-scaling computational cost with respect to the number of atoms within ONETEP is achieved through the exploitation of the "near-sightedness of electronic matter" principle.…”
Section: Introductionmentioning
confidence: 99%