2022
DOI: 10.1016/j.neuroimage.2021.118799
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Longitudinal brain atlases of early developing cynomolgus macaques from birth to 48 months of age

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Cited by 8 publications
(2 citation statements)
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“…1x magnification tiled scans of the cynomolgus brains were first stitched using TeraStitcher then converted to Imaris image pyramid volumes using ImarisFileConverter. The 2x down sampled volume was then loaded and flipped along the y-axis to bring it into rough alignment with the T1 weighted template image for the 24-month-old cynomolgus atlas 80 . The brain volume was N4 corrected using a shrink factor of 32x, with 5 levels of correction and 50 iterations at each level.…”
Section: Cynomolgus Monkey Brain Atlas Registrationmentioning
confidence: 99%
“…1x magnification tiled scans of the cynomolgus brains were first stitched using TeraStitcher then converted to Imaris image pyramid volumes using ImarisFileConverter. The 2x down sampled volume was then loaded and flipped along the y-axis to bring it into rough alignment with the T1 weighted template image for the 24-month-old cynomolgus atlas 80 . The brain volume was N4 corrected using a shrink factor of 32x, with 5 levels of correction and 50 iterations at each level.…”
Section: Cynomolgus Monkey Brain Atlas Registrationmentioning
confidence: 99%
“…Vertex-wise development analysis allows for the examination of cortical development at a highly localized level without reliance on predefined cortical parcellations, enabling the characterization of spatiotemporally fine-scale developmental patterns and providing fundamental insights into the regional specialization of the early developing brain ( 20 22 ). However, due to the difficulties in analyzing brain Magnetic Resonance (MR) images of early developing macaques, which typically exhibit extremely low tissue contrast and spatiotemporally heterogeneous imaging appearances as in human infants ( 23 25 ), our knowledge remains scarce on the vertex-wise developmental trajectories and spatial patterns of macaque cortical thickness and surface area during early postnatal stages.…”
mentioning
confidence: 99%