In this study, Gas Chromatography-Mass Spectrometry (GC-MS) was used to compare the chemical compositions of Ambrosia maritima aerial parts collected from two different locations in Ed-Damer region, River Nile State, Northern Sudan. The results showed that 14 compounds of the two plant samples contained the same chemical composition, which was 2-methoxy-4-vinyl phenol, Decanoic acid ethyl ether, 1-cyclohexene 1-ol, 2,6dimethyl acetate, 2-acetoxy 1,1,10 trimethyl 6,9-epidioxydecalin, 6,8-nonadien-2-one, 6methyl-5-(1-methylethylidene-, Ethyl alpha-d-glucopyranoside, Hexadecanoic acid, methyl ester, n-Hexadecanoic acid, Hexadecanoic acid, ethyl ester, Phytol, Androstan-17one,3-ethyl-3-hydroxy (5-alpha), 17-beta-hydroxy-6-oxo-4,5-secoandrosta-, 5-alpha-17alpha pregnan-12 one and Cyclohexanamine,N-(hexa-hydro-3 methylene 2(3H) -Comp. of Chem. Composition of A. maritima Elshafie et. al.benzofuranyledene)-but the percentage content was different. The main components of the ethanolic extracts of the two samples were different. N,N-dimethylglycine (2.16%) , Norethindrone (19.76%), alpha-amyrin (0.66%) and others were only detected in Ambrosia maritima (sample Am1), Nitroacetamine (16.07%) , linoleic acid, ethyl ester (9.83%), gamma-sitosterol (5.59%), and others were only detected in Ambrosia maritima (sample Am2).