The transient receptor potential vanilloid 1 (TRPV1) channel is an essential component of the cellular mechanism through which noxious stimuli evoke pain. Functional and structural characterizations of TRPV1 shed light on vanilloid activation, yet the mechanisms for temperature and proton gating remain largely unknown. Spectroscopic approaches are needed to understand the mechanisms by which TRPV1 translates diverse stimuli into channel opening. Here, we have engineered a minimal cysteine-less rat TRPV1 construct (eTRPV1) that can be stably purified and reconstituted for spectroscopic studies. Biophysical analyses of TRPV1 constructs reveal that the S5-pore helix loop influences protein stability and vanilloid and proton responses, but not thermal sensitivity. Cysteine mutants retain function and stability for double electron-electron resonance (DEER) and electron paramagnetic resonance (EPR) spectroscopies. DEER measurements in the closed state demonstrate that eTRPV1 reports distances in the extracellular vestibule, equivalent to those observed in the apo TRPV1 structure. EPR measurements show a distinct pattern of mobilities and spectral features, in detergent and liposomes, for residues at the pore domain that agree with their location in the TRPV1 structure. Our results set the stage for a systematic characterization of TRPV1 using spectroscopic approaches to reveal conformational changes compatible with thermal-and ligand-dependent gating.The detection of painful stimuli involves ion channels that depolarize sensory neurons to elicit or intensify inflammatory pain 1 . One such channel is the transient receptor potential vanilloid 1 (TRPV1) expressed by primary afferent sensory neurons, where it contributes to the mechanisms underlying pain hypersensitivity 2 . TRPV1 is a polymodal ion channel activated by noxious heat (>42 °C), the pungent ingredient of "hot" chili peppers (capsaicin) 3 , animal toxins 4-6 , extracellular protons 7 , and modulated by proalgesic inflammatory agents (e.g., bradykinin 8 , bioactive lipids 9, 10 ) produced in response to tissue injury. Because TRPV1 is an important therapeutic target 11 , it is crucial to determine the structural rearrangements that lead to channel opening by multiple stimuli. Functional and structural studies have provided insights into TRPV1 activation mechanisms by vanilloids and toxins 5,[12][13][14][15][16][17][18] . It is generally agreed that upon vanilloid binding, the interaction between capsaicin or resiniferatoxin [RTX] with the S4-S5 linker triggers rearrangements consistent with opening of the lower gate 14, 15 . Likewise, venom toxins (e.g., double knot toxin, DkTx) stabilize the open state by inserting hydrophobic residues into the membrane phospholipids and binding to the TRPV1 extracellular pore region 5,16,17 . Aside from vanilloids and toxins, acidification of the extracellular media can activate and/or potentiate TRPV1 responses to other stimuli 7,13 . For instance, the heat response is potentiated by extracellular protons within the pH ...