Magnetotactic bacteria are aquatic microorganisms with the ability to biomineralise membraneenclosed magnetic nanoparticles, called magnetosomes. these magnetosomes are arranged into a chain that behaves as a magnetic compass, allowing the bacteria to align in and navigate along the Earth's magnetic field lines. According to the magneto-aerotactic hypothesis, the purpose of producing magnetosomes is to provide the bacteria with a more efficient movement within the stratified water column, in search of the optimal positions that satisfy their nutritional requirements. However, magnetosomes could have other physiological roles, as proposed in this work. Here we analyse the role of magnetosomes in the tolerance of Magnetospirillum gryphiswaldense MSR-1 to transition metals (co, Mn, ni, Zn, cu). By exposing bacterial populations with and without magnetosomes to increasing concentrations of metals in the growth medium, we observe that the tolerance is significantly higher when bacteria have magnetosomes. The resistance mechanisms triggered in magnetosome-bearing bacteria under metal stress have been investigated by means of x-ray absorption near edge spectroscopy (XANES). XANES experiments were performed both on magnetosomes isolated from the bacteria and on the whole bacteria, aimed to assess whether bacteria use magnetosomes as metal storages, or whether they incorporate the excess metal in other cell compartments. Our findings reveal that the tolerance mechanisms are metal-specific: Mn, Zn and cu are incorporated in both the magnetosomes and other cell compartments; co is only incorporated in the magnetosomes, and Ni is incorporated in other cell compartments. In the case of Co, Zn and Mn, the metal is integrated in the magnetosome magnetite mineral core. Magnetotactic bacteria (MTB) are aquatic microorganisms able to passively align parallel to the Earth's geomagnetic field lines while they actively swim. This behavior, known as magnetotaxis, is due to the presence of unique intracellular magnetic organelles called magnetosomes 1-4. The magnetosomes are intracellular inclusions composed by a core of magnetic iron mineral, typically magnetite (Fe 3 O 4) or greigite (Fe 3 S 4), enclosed by a thin membrane. Magnetotactic bacteria are widespread in freshwater and marine environments 5. They are easily detected in chemically and redox stratified sediments and water columns, predominantly at the oxic-anoxic transition zones (OATZ). Bacteria living in OATZ, with vertical chemical gradients, are continually searching the optimal position in the stratified water column in order to satisfy their nutritional requirements. Under these circumstances, magnetotaxis is thought to be a great advantage by increasing the efficiency of chemotaxis 1. Due to their inclination, the geomagnetic field lines act as vertical pathways in a stratified environment, therefore the bacteria aligned in the Earth's field reduce a three dimensional search to a single dimension, swimming updownwards the stratified column.