Immune responses to malaria infections are characterized by strong T and B cell activation, which, in Key words: malaria -thymus -Plasmodium berghei -mice Malaria infections are characterized by defective immune responses, with poor efficacy and, in some cases, with the occurrence of immunopathology. The major lifethreatening malaria-related complications -cerebral malaria and severe anemia -have a strong immunological component in humans (Mackintosh et al. 2004) as well as in experimental models (De Souza & Riley 2002, Carvalho et al. 2003.The Plasmodium berghei ANKA infection in CBA mouse is an established model of malaria with neurological involvement (the so-called experimental cerebral malaria), and infection with blood stage parasites leads to 100% lethality. The immune response in this model is not only ineffective against parasite growth but also responsible for the 60-90% incidence of cerebral malaria (CM), mainly characterized by strong Th1 T cell responses (Hunt & Grau 2003), macrophage hyperactivation (Carvalho et al. 2000) and also CD8 + T cell cytotoxicity (Belnoue et al. 2002). T lymphocytes are central in CM pathogenesis. Early thymectomized CBA mice become resistant to CM development (Grau et al. 1986). Treatment of adult mice with anti-CD4 or anti-CD8 monoclonal antibodies also abrogate CM development, depending on the moment they are administered -early in infection for anti-CD4 and late in the infection for anti-CD8 (Grau et al. 1986 al. 2002). CM seems to be mediated by cells bearing αβ T cell receptors (TCR), since mice lacking T cells of the αβ lineage (TCR αβ -/-), but not of the γδ lineage (TCR γδ -/-), were resistant to CM development (Boubou et al. 1999). In addition, these authors showed that expression of CM was associated with an increase in T cells bearing the Vβ8.1 and Vβ8.2 segments, and CM expression was reduced in mice rendered deficient in cells bearing these segments.Although all the events concerning the participation of T cells in CM physiopathogenesis are related to peripheral responses, events occurring in the thymus cannot be disregarded. Indeed, infection by other protozoan parasites can potentially affect thymic function and then modulate T cell responses. In Trypanosoma cruzi infection in Balb/c mouse, intense thymic atrophy is reported, with loss of double positive immature thymocytes and appearance of such immature cells in secondary lymphoid organs (Mendes-da-Cruz et al. 2003). In addition, lymphocytes carrying normally forbidden TCR Vβ families are also exported from the thymus. According to these authors such cells could play a role in the autoimmune responses commonly observed during T. cruzi infections. Therefore, infection can affect thymic function resulting in pathological consequences or altering the efficacy of the immune response. In malaria, the consequences of malaria infection on thymus structure and function have been overlooked, with few works on the subject (Krettli & Nussenzweig 1974). In the present work, we evaluated the sequential histologica...