Increased participation and expanded public interest in the Paralympic Games underline the growing importance of competitive sports opportunities for individuals with disabilities. Injury surveillance is increasingly recognized as a key element of sports medicine research, and recent work has suggested that rates of injury, anatomic location of injury, and associated illness may in fact differ in athletes with disabilities. A greater understanding of the patterns of injury and illness for athletes with disabilities has important clinical implications for rehabilitation and sports medicine physicians. This review summarizes commonly observed musculoskeletal injuries that affect athletes with disabilities, including athletes using sports wheelchairs for competition, athletes with amputations, athletes with cerebral palsy, and athletes with visual impairment. Medical issues that may affect athletes with disabilities include autonomic dysreflexia, complications of neurogenic bowel and bladder, impaired thermoregulation, and skin breakdown. As a growing number of athletes with disabilities participate in sports activities, physicians must develop an increased understanding and expertise in treating and preventing injuries in these athletes.