Wide-scale automatic monitoring based on the Normalized Difference Water Index (NDWI) and Mask Region-based Convolutional Neural Network (Mask R-CNN) with remote sensing images is of great significance for the management of aquaculture areas. However, different spatial resolutions brought different cost and model performance. To find more suitable image spatial resolutions for automatic monitoring offshore aquaculture areas, seven different resolution remote sensing images in the Sandu’ao area of China, from 2 m, 4 m, to 50 m, were compared. Results showed that the remote sensing images with a resolution of 15 m and above can achieve the corresponding recognition effect when no financial issues were considered, with the F1 score of over 0.75. By establishing a cost-effectiveness evaluation formula that comprehensively considers image price and recognition effect, the best image resolution in different scenes can be found, thus providing the most appropriate data scheme for the automatic monitoring of offshore aquaculture areas.