Wheat is the most consumed crop worldwide. Zeolite application combined with good tillage practices are good combinations that provide better soil conditions for wheat crops. Zeolite also provides a good layer for carbon to be absorbed into the soil and can retain carbon for hundreds of years. The current study aimed to investigate the effect of tillage practices and zeolite treatments on soil carbon retention and wheat crop productivity. Arranging the treatments implemented according to a factorial randomized block design which includes three replications. Tillage treatments include three levels vis: T1= 6 tillage practices with the help of cultivator (farmer practice/control), T2 (minimum tillage), and T3 (2 cultivation with cultivator + Mold-board plough). The zeolite applications consist of four levels: Z1 = 0, Z2 = 5, Z3 = 10 and Z4 = 15 t ha−1. The effect of the interaction between zeolite treatments and tillage practices on various factors related to soil and crops such as emission of carbon dioxide (CO2), dissolved organic carbon, soil organic carbon, and the productivity and components of wheat productivity. Zeolite applied at 10 t ha−1 in combination with minimum tillage gave significant differences in terms of CO2 emission, dissolved organic carbon, and on soil organic carbon. The experimental results showed that minimum CO2 emission (25.43 and 31.12 (kg CO2-C ha−1 h−1), dissolved organic carbon (4.80 and 4.90 g C kg−1), soil organic carbon (7.88 and 7.97 g C kg−1), plant height (92.14 and 92.97 cm), spike length (11.88 ad 12.11 cm), number of spikelets (20.11 and 20.98), number of tillers (278.65 and 283.93) per unit area, 1000 grain weight (50.74 and 51.54 g), biological yield (8134.87 and 8187.38 kg ha−1) and grain yield (2984.28 and 3028.96 kg ha−1) and harvest index (36.69 and 37.04%) of wheat was observed in zeolite applied at 10 t ha−1 with minimum tillage practice (T2 × Z3) compared to control and other treatments for both the years, respectively. It is therefore concluded that minimum tillage should be practiced in wheat crops with the application of zeolite at 10 t ha−1 to obtain better yield and soil carbon retention under rain-fed conditions.